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Protein Overview: VAL1_ARATH

General Information:
Name(s) found: VAL1_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75331397|sp|Q8W4L5.1|VAL1_ARATH RecName: Full=B3 domain-containing transcription repressor VAL1; AltName: Full=Protein VP1/ABI3-LIKE 1; AltName: Full=Protein HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE 2 [NCBI NR]
  • gi|60677677|dbj|BAD90970.1| transcription factor B3-EAR motif [Arabidopsis thaliana] [NCBI NR]
  • gi|30684597|ref|NP_850146.1| HSI2 (HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2); transcription factor/ transcription repressor [Arabidopsis thaliana] [NCBI NR]
  • gi|17064832|gb|AAL32570.1| putative VP1/ABI3 family regulatory protein [Arabidopsis thaliana] [NCBI NR]
  • B3 domain-containing transcription repressor VAL1 OS=Arabidopsis thaliana GN=VAL1 PE=1 SV=1 [Swiss-Prot]
  • putative VP1/ABI3 family regulatory protein [Arabidopsis thaliana]gi|30684597|ref|NP_850146.1| transcriptional factor B3 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 HSI2 is a member of a novel family of B3 domain proteins with a sequence similar to the ERF-associated amphiphilic repression (EAR) motif [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: HSI2 | HSI2 (HIGH-LEVEL EXPRESSION OF SUGAR-INDUCIBLE GENE 2); transcription factor/ transcription repressor | chr2:12987981-12991801 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative VP1/ABI3 family regulatory protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • HSI2; transcription factor/ transcriptional repressor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • transcription factor B3-EAR motif [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: HSI2, VAL1 | high-level expression of sugar-inducible gene 2 | chr2:12980904-12984724 REVERSE LENGTH=790 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 790 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    mitochondrion [IDA]
    Biological Process: positive regulation of seed germination [IGI]
    response to abscisic acid stimulus [TAS]
    response to sucrose stimulus [TAS]
    Molecular Function: transcription factor activity [ISS]
    transcription repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFEVKMGSKM CMNASCGTTS TVEWKKGWPL RSGLLADLCY RCGSAYESSL FCEQFHKDQS  60
   61 GWRECYLCSK RLHCGCIASK VTIELMDYGG VGCSTCACCH QLNLNTRGEN PGVFSRLPMK 120
  121 TLADRQHVNG ESGGRNEGDL FSQPLVMGGD KREEFMPHRG FGKLMSPEST TTGHRLDAAG 180
  181 EMHESSPLQP SLNMGLAVNP FSPSFATEAV EGMKHISPSQ SNMVHCSASN ILQKPSRPAI 240
  241 STPPVASKSA QARIGRPPVE GRGRGHLLPR YWPKYTDKEV QQISGNLNLN IVPLFEKTLS 300
  301 ASDAGRIGRL VLPKACAEAY FPPISQSEGI PLKIQDVRGR EWTFQFRYWP NNNSRMYVLE 360
  361 GVTPCIQSMM LQAGDTVTFS RVDPGGKLIM GSRKAANAGD MQGCGLTNGT STEDTSSSGV 420
  421 TENPPSINGS SCISLIPKEL NGMPENLNSE TNGGRIGDDP TRVKEKKRTR TIGAKNKRLL 480
  481 LHSEESMELR LTWEEAQDLL RPSPSVKPTI VVIEEQEIEE YDEPPVFGKR TIVTTKPSGE 540
  541 QERWATCDDC SKWRRLPVDA LLSFKWTCID NVWDVSRCSC SAPEESLKEL ENVLKVGREH 600
  601 KKRRTGESQA AKSQQEPCGL DALASAAVLG DTIGEPEVAT TTRHPRHRAG CSCIVCIQPP 660
  661 SGKGRHKPTC GCTVCSTVKR RFKTLMMRRK KKQLERDVTA AEDKKKKDME LAESDKSKEE 720
  721 KEVNTARIDL NSDPYNKEDV EAVAVEKEES RKRAIGQCSG VVAQDASDVL GVTELEGEGK 780
  781 NVREEPRVSS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..187] FFAS03 1.26 No description for 2dfyX was found.
    2 View Details [188..283] deduced N/A No confident structure predictions are available.
    3 View Details [284..413] PSI-BLAST 33.30103 Solution Structure of the B3 DNA-Binding Domain of RAV1
    4 View Details [414..502] deduced N/A No confident structure predictions are available.
    5 View Details [503..619] FFAS03 2.83 No description for 2e61A was found.
    6 View Details [620..790] MSA 3.104993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle