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Protein Overview: gi|59958328, gi|...

General Information:
Name(s) found: gi|59958328 [NCBI NR]
gi|30682884 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|59958328|gb|AAX12874.1| At2g25740 [Arabidopsis thaliana] [NCBI NR]
  • gi|30682884|ref|NP_850069.1| ATP-dependent protease La (LON) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: ATP-dependent peptidase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDERIRERE RLQIEQIREL DFEELQVEEV DDLHDSDSDD NNDDLSSFPF SSHAQASGNL  60
   61 GDDELMFNPA LASLHMYLGE VEDTQNRVSF VDGGTVLKIP LFYLEGVVLF PEATLPLRII 120
  121 QPSFLAAVER ALNQANAPST IGVIRVYREG AQFKYASVGT TAEIRQYRRL GDGSFNVITR 180
  181 GQQRFRLKHR WTDVEGFTCG EVQIVDEDVP LRTPRDAFGK LVPLSKLRGR YPLGTASLST 240
  241 PLRDMDAQSE ANSEESFESA LSPSEKRLHY SVVDSIFCNS TSSDDDQVVS TSTVQSSGSN 300
  301 PYSLRSIGCL ASSHDNENED EQSAIGKTPV SQEKYQKQNR LASFRQNTDL SRFRMTPRAF 360
  361 WPFWAYRMFD SYYLAQRAVD LWKQIVGVPN MEAFVNKPDI LSFSIASKIP VSESIRQELL 420
  421 ELDGVSYRLQ REIELLESFD RVRCIHCQTV IARRKDMLVM SNEGPLGAYV NPHGYVHEIM 480
  481 TFYKANDIAL RGRPVKKDSW FPGYAWTIAN CATCETQLGW HFTATNKKLK PSSFWAVRGS 540
  541 QVADDMR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] deduced N/A No confident structure predictions are available.
    2 View Details [94..277] PSI-BLAST 22.69897 Crystal Structure of the Hypothetical Protein BPP1347 from Bordetella parapertussis, Northeast Structural Genomics Target BoR27.
    3 View Details [278..471] FFAS03 2.6 Crystal Structure of the Hypothetical Protein BPP1347 from Bordetella parapertussis, Northeast Structural Genomics Target BoR27.
    4 View Details [472..547] MSA 2.025996 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle