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Protein Overview: AP5M_ARATH

General Information:
Name(s) found: AP5M_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30681135|ref|NP_850004.1| protein binding [Arabidopsis thaliana] [NCBI NR]
  • gi|19699154|gb|AAL90943.1| At2g20790/F5H14.24 [Arabidopsis thaliana] [NCBI NR]
  • gi|18087614|gb|AAL58937.1|AF462850_1 At2g20790/F5H14.24 [Arabidopsis thaliana] [NCBI NR]
  • AP-5 complex subunit mu OS=Arabidopsis thaliana GN=AP5M PE=2 SV=1 [Swiss-Prot]
  • At2g20790/F5H14.24 [Arabidopsis thaliana]gi|18087614|gb|AAL58937.1| At2g20790/F5H14.24 [Arabidopsis thaliana]gi|30681135|ref|NP_850004.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | protein binding / protein transporter | chr2:8957243-8959694 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • At2g20790/F5H14.24 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | clathrin adaptor complexes medium subunit family protein | chr2:8950162-8952613 REVERSE LENGTH=613 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g20790/F5H14.24 OS=Arabidopsis thaliana GN=At2g20790 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 613 amino acids

    Gene Ontology:
    Cellular Component: clathrin adaptor complex [IEA]
    Biological Process: vesicle-mediated transport [IEA]
    intracellular protein transport [IEA]
    Molecular Function: protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSGCSIRAL WIINNQDTVV FSRRFPVVEK QWCSAYKTEN ENTGLDLPRL PTDQQISDSF  60
   61 TRRKRREGST RGYGIRVAQS TKGSDSWVDD PITRHIISLC LTEEDDDDDD ERNILWPIAL 120
  121 HTKALYSILV LPLVEPKEMK DYVKLCRRSD CGPAVGEDLS LSSLLLNISS ITGAFMVAHA 180
  181 FGDIISGDTV EPEVVVSVSP SVGGLFDSLT GSIGISSRAK PVAAPVASSN PSGAAITGAT 240
  241 ASDAPKAGSR LLDRDLLRNF IATAMPFGTP LDLSLSNISA MKANGFSSAD PPPQELKQPA 300
  301 WKPYLYKGKQ RLLFTIHETV SAAMYDRDEI PDNVSVAGQI NCRAELEGLP DVSFPLAGLS 360
  361 TAHIEAISFH PCAQVPAHGI DKQNIVFQPP LGNFVLMRYQ AGCGLGPPVK GFYQLSMVSE 420
  421 DEGAFLFKVH LMEGYKAPLS MEFCTITMPF PRRRIVAFDG TPSAGTVLTT EHSVEWRILG 480
  481 SGRSLSGKSL EATFPGTIKF SPLQSRRKGD GDDEESEDES AENVVNVEDF LVQKMNKDLP 540
  541 AAELEEPFCW QAYDYAKVSF KIVGASVSRM SIDTKSVNIY PTTKSPVEFS AQVTSGDYIL 600
  601 WNTLGKAPSA AVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..238] deduced N/A No confident structure predictions are available.
    2 View Details [239..613] PSI-BLAST 113.0 AP1 clathrin adaptor core


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle