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Protein Overview: gi|55647329

General Information:
Name(s) found: gi|55647329 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|55647329|ref|XP_523910.1| PREDICTED: polypeptide N-acetylgalactosaminyltransferase 1 isoform 4 [Pan troglodytes] [NCBI NR]
    • Organism: Pan troglodytes
    Length: 559 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRKFAYCKVV LATSLIWVLL DMFLLLYFSE CNKCDEKKER GLPAGDVLEP VQKPHEGPGE  60
   61 MGKPVVIPKE DQEKMKEMFK INQFNLMASE MIALNRSLPD VRLEGCKTKV YPDNLPTTSV 120
  121 VIVFHNEAWS TLLRTVHSVI NRSPRHMIEE IVLVDDASER DFLKRPLESY VKKLKVPVHV 180
  181 IRMEQRSGLI RARLKGAAVS KGQVITFLDA HCECTVGWLE PLLARIKHDR RTVVCPIIDV 240
  241 ISDDTFEYMA GSDMTYGGFN WKLNFRWYPV PQREMDRRKG DRTLPVRTPT MAGGLFSIDR 300
  301 DYFQEIGTYD AGMDIWGGEN LEISFRIWQC GGTLEIVTCS HVGHVFRKAT PYTFPGGTGQ 360
  361 IINKNNRRLA EVWMDEFKNF FYIISPGVTK VDYGDISSRV GLRHKLQCKP FSWYLENIYP 420
  421 DSQIPRHYFS LGEIRNVETN QCLDNMARKE NEKVGIFNCH GMGGNQVFSY TANKEIRTDD 480
  481 LCLDVSKLNG PVTMLKCHHL KGNQLWEYDP VKLTLQHVNS NQCLDKATEE DSQVPSIRDC 540
  541 NGSRSQQWLL RNVTLPEIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..98] deduced N/A No confident structure predictions are available.
    2 View Details [99..559] PSI-BLAST 105.0 The Crystal Structure of UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferase-T1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • polypeptide N-acetylgalactosaminyltransferase activity
    		•  8.87768693404638 bayes_pls_golite062009
  • UDP-glycosyltransferase activity
    		•  6.50620584399191 bayes_pls_golite062009
  • acetylgalactosaminyltransferase activity
    		•  6.18010634203776 bayes_pls_golite062009
  • mannosyltransferase activity
    		•  5.57855076532185 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  4.57071306027628 bayes_pls_golite062009
  • transferase activity, transferring hexosyl groups
    		•  4.49413422196176 bayes_pls_golite062009
  • alpha-1,2-mannosyltransferase activity
    		•  3.80392076707564 bayes_pls_golite062009
  • N-acetyllactosamine synthase activity
    		•  3.59789520866149 bayes_pls_golite062009
  • lactose synthase activity
    		•  3.59789520866149 bayes_pls_golite062009
  • transferase activity
    		•  2.62166586999833 bayes_pls_golite062009
  • UDP-galactosyltransferase activity
    		•  2.58196286090865 bayes_pls_golite062009
  • galactosyltransferase activity
    		•  2.49617255507474 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.01768771829228 bayes_pls_golite062009
  • catalytic activity
    		•  1.88676710996045 bayes_pls_golite062009
  • nucleotidyltransferase activity
    		•  1.31793036737589 bayes_pls_golite062009
  • beta-N-acetylglucosaminylglycopeptide beta-1,4-galactosyltransferase activity
    		•  1.19868452856458 bayes_pls_golite062009
  • glucuronosyltransferase activity
    		•  1.00493625552737 bayes_pls_golite062009
  • galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity
    		•  0.62994365148937 bayes_pls_golite062009
  • UDP-N-acetylglucosamine diphosphorylase activity
    		•  0.412018910498896 bayes_pls_golite062009
  • uridylyltransferase activity
    		•  0.321928989676507 bayes_pls_golite062009
  • mannose-phosphate guanylyltransferase activity
    		•  0.2363835251362 bayes_pls_golite062009
  • cytidylyltransferase activity
    		•  0.218759888732981 bayes_pls_golite062009
  • binding
    		•  0.074398891333042 bayes_pls_golite062009
  • guanylyltransferase activity
    		•  0.0539392112504681 bayes_pls_golite062009
  • alpha-1,3-mannosylglycoprotein 2-beta-N-acetylglucosaminyltransferase activity
    		•  0.0425594043915902 bayes_pls_golite062009
  • acetylglucosaminyltransferase activity
    		•  0.0278258721775009 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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