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Protein Overview: EG11526

General Information:
Name(s) found: ydcC / EG11526 [EcoGene]
Description(s) found:
Found 11 descriptions.
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  • H repeat-associated putative transposase / H repeat-associated putative transposase, RhsE-linked, function unknown [EcoGene]
    • Organism: Escherichia coli K-12
    Length: 378 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELKKLMGHI SIIPDYRQAW KMEHKLSDIL LLTICAVISG AEGWEDIEDF GETHPDFLKQ  60
   61 YGDFENGIPV HDTIARVVSC ISPAKFHECF INWMRDCHSS DDKDVIAIDG KTLRHSYDKS 120
  121 RRRGAIHVIS AFSTMHSLVI GQIKTDEKSN EITAIPELLN MLDIKGKIIT TDAMGCQKDI 180
  181 AEKIQKQGGD YLFAVKGNQG RLNKAFEEKF PLKELNNPAH DSYAMSEKSH GREEIRLHIV 240
  241 CDVPDELIDF TFEWKGLKKL CVAVSFRSII AEQKKELEMT VRYYISSADL TAEKFATAIR 300
  301 NHWHVENKLH WRLDVVMNED DCKIRRGNAA ELFSGIRHIA INILTNDKVF KAGLRRKMRK 360
  361 AAMDRNYLAS VLTGSGLS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..378] FFAS03 1.24 Transposase inhibitor (Tn5 transposase)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle