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Protein Overview: RL11_RAT

General Information:
Name(s) found: RL11_RAT [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • 60S ribosomal protein L11 OS=Rattus norvegicus GN=Rpl11 PE=1 SV=2 [Swiss-Prot]
    • Organism: Rattus norvegicus
    Length: 178 amino acids

    Gene Ontology:
    Cellular Component: cytosol [UNKNOWN]
    nucleolus [UNKNOWN]
    ribosome [IEA]
    intracellular [IEA]
    Biological Process: protein targeting [UNKNOWN]
    ribosomal large subunit biogenesis [UNKNOWN]
    rRNA processing [UNKNOWN]
    translational elongation [UNKNOWN]
    translation [IEA]
    Molecular Function: protein binding [UNKNOWN]
    structural constituent of ribosome [IEA]
    rRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAQDQGEKEN PMRELRIRKL CLNICVGESG DRLTRAAKVL EQLTGQTPVF SKARYTVRSF  60
   61 GIRRNEKIAV HCTVRGAKAE EILEKGLKVR EYELRKNNFS DTGNFGFGIQ EHIDLGIKYD 120
  121 PSIGIYGLDF YVVLGRPGFS IADKKRRTGC IGAKHRISKE EAMRWFQQKY DGIILPGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..178] PSI-BLAST 59.30103 Structure of the ribosomal 80S-eEF2-sordarin complex from yeast obtained by docking atomic models for RNA and protein components into a 11.7 A cryo-EM map. This file, 1S1I, Contains 60S subunit. The 40S Ribosomal Subunit Is In File 1S1H.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle