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Protein Overview: H4_CHICK

General Information:
Name(s) found: H4_CHICK [Swiss-Prot]
Description(s) found:
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  • pir||JH0507 histone H4.III and H4.IV - chicken [NCBI NR]
  • gi|83745135|ref|NP_001032932.1| similar to germinal histone H4 gene [Gallus gallus] [NCBI NR]
  • gi|83745133|ref|NP_001032934.1| germinal histone H4 [Gallus gallus] [NCBI NR]
  • gi|7767079|pdb|1EQZ|H Chain H, X-Ray Structure Of The Nucleosome Core Particle At 2.5 A Resolution [NCBI NR]
  • gi|7767075|pdb|1EQZ|D Chain D, X-Ray Structure Of The Nucleosome Core Particle At 2.5 A Resolution [NCBI NR]
  • gi|75766317|pdb|2ARO|H Chain H, Crystal Structure Of The Native Histone Octamer To 2.1 Angstrom Resolution, Crystalised In The Presence Of S- Nitrosoglutathione [NCBI NR]
  • gi|75766313|pdb|2ARO|D Chain D, Crystal Structure Of The Native Histone Octamer To 2.1 Angstrom Resolution, Crystalised In The Presence Of S- Nitrosoglutathione [NCBI NR]
  • gi|63476|emb|CAA26140.1| unnamed protein product [Gallus gallus] [NCBI NR]
  • gi|63472|emb|CAA26137.1| unnamed protein product [Gallus gallus] [NCBI NR]
  • gi|51317337|sp|P62801.2|H4_CHICK RecName: Full=Histone H4 [NCBI NR]
  • gi|51247796|pdb|1TZY|H Chain H, Crystal Structure Of The Core-Histone Octamer To 1.90 Angstrom Resolution [NCBI NR]
  • gi|51247792|pdb|1TZY|D Chain D, Crystal Structure Of The Core-Histone Octamer To 1.90 Angstrom Resolution [NCBI NR]
  • gi|50729224|ref|XP_425463.1| PREDICTED: similar to germinal histone H4 gene [Gallus gallus] [NCBI NR]
  • ref|XP_416191.1| PREDICTED: similar to germinal histone H4 gene [Gallus gallus] [NCBI NR]
  • ref|XP_416187.1| PREDICTED: similar to germinal histone H4 gene [Gallus gallus] [NCBI NR]
  • gi|211908|gb|AAA73092.1| [Chicken histone H4 protein gene, complete cds.], gene product [NCBI NR]
  • gi|211906|gb|AAA73091.1| [Chicken histone H4 protein gene, complete cds.], gene product [NCBI NR]
  • gi|1493811|gb|AAC60001.1| histone H4-VII [NCBI NR]
  • gi|1493809|gb|AAC59999.1| histone H4-VI [NCBI NR]
  • gi|13096392|pdb|1HQ3|H Chain H, Crystal Structure Of The Histone-Core-Octamer In KclPHOSPHATE [NCBI NR]
  • gi|13096388|pdb|1HQ3|D Chain D, Crystal Structure Of The Histone-Core-Octamer In KclPHOSPHATE [NCBI NR]
  • gi|118082627|ref|XP_001233180.1| PREDICTED: similar to histone H4 [Gallus gallus] [NCBI NR]
  • gi|118082613|ref|XP_001233095.1| PREDICTED: similar to histone H4 [Gallus gallus] [NCBI NR]
  • gi|118082604|ref|XP_001233009.1| PREDICTED: similar to histone H4 [Gallus gallus] [NCBI NR]
  • gi|118082590|ref|XP_425458.2| PREDICTED: germinal histone H4 [Gallus gallus] [NCBI NR]
  • Histone H4 OS=Gallus gallus GN=H4-I PE=1 SV=2 [Swiss-Prot]
  • similar to germinal histone H4 gene [Rattus norvegicus]gi|34876388|ref|XP_344599.1| similar to germinal histone H4 gene [Rattus norvegicus]gi|27686283|ref|XP_225382.1| similar to germinal histone H4 gene [Rattus norvegicus]gi|27686379|ref|XP_225373.1| [nrdb_11152004_Chlamydomonas]
  • PREDICTED: similar to histone H4 [Gallus gallus] [NCBI-RefSeq_chicken_na_04-20-2007_reversed.fasta]
  • PREDICTED: germinal histone H4 [Gallus gallus] [NCBI-RefSeq_chicken_na_04-20-2007_reversed.fasta]
  • similar to germinal histone H4 gene [Gallus gallus] [NCBI-RefSeq_chicken_na_04-20-2007_reversed.fasta]
  • germinal histone H4 [Gallus gallus] [NCBI-RefSeq_chicken_na_04-20-2007_reversed.fasta]
  • PREDICTED: similar to germinal histone H4 gene [Gallus gallus] [HumanGallus06162005.fasta]
  • Chain H, Crystal Structure Of The Core-Histone Octamer To 1.90 Angstrom Resolution [nr-271106-contam.fasta]
  • Chain H, X-Ray Structure Of The Nucleosome Core Particle At 2.5 A Resolution [nr-271106-contam.fasta]
  • unnamed protein product [Gallus gallus] [nr-271106-contam.fasta]
  • histone H4-VII [nr-271106-contam.fasta]
  • histone H4-VI [nr-271106-contam.fasta]
  • Chain H, Crystal Structure Of The Native Histone Octamer To 2.1 Angstrom Resolution, Crystalised In The Presence Of S- Nitrosoglutathione [nr-271106-contam.fasta]
  • Chain D, Crystal Structure Of The Core-Histone Octamer To 1.90 Angstrom Resolution [nr-271106-contam.fasta]
  • Chain D, Crystal Structure Of The Native Histone Octamer To 2.1 Angstrom Resolution, Crystalised In The Presence Of S- Nitrosoglutathione [nr-271106-contam.fasta]
  • Chain D, Crystal Structure Of The Histone-Core-Octamer In KclPHOSPHATE [nr-271106-contam.fasta]
  • [Chicken histone H4 protein gene, complete cds.], gene product [nr-271106-contam.fasta]
  • Chain H, Crystal Structure Of The Histone-Core-Octamer In KclPHOSPHATE [nr-271106-contam.fasta]
  • Histone H4 [nr-271106-contam.fasta]
  • Chain D, X-Ray Structure Of The Nucleosome Core Particle At 2.5 A Resolution [nr-271106-contam.fasta]
  • PREDICTED: histone H4-like [Gallus gallus] [chicken.121711-contam.fasta]
    • Organism: Gallus gallus
    Length: 103 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGRGKGGKG LGKGGAKRHR KVLRDNIQGI TKPAIRRLAR RGGVKRISGL IYEETRGVLK  60
   61 VFLENVIRDA VTYTEHAKRK TVTAMDVVYA LKRQGRTLYG FGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..103] PSI-BLAST 34.30103 Histone H4

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.581886805340955 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle