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Protein Overview: gi|2826884, gi|2...

General Information:
Name(s) found: gi|39545932 [NCBI NR]
gi|30680153 [NCBI NR]
gi|30680148 [NCBI NR]
gi|2826884 [NCBI NR]
gi|225897890 [NCBI NR]
gi|222423282 [NCBI NR]
gi|11358887 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • gi|39545932|gb|AAR28029.1| TFIIA-L1 [Arabidopsis thaliana] [NCBI NR]
  • gi|30680153|ref|NP_172228.3| transcription factor IIA large subunit / TFIIA large subunit (TFIIA-L) [Arabidopsis thaliana] [NCBI NR]
  • gi|30680148|ref|NP_850937.1| transcription factor IIA large subunit / TFIIA large subunit (TFIIA-L) [Arabidopsis thaliana] [NCBI NR]
  • gi|2826884|emb|CAA11525.1| transcription factor IIA large subunit [Arabidopsis thaliana] [NCBI NR]
  • gi|225897890|dbj|BAH30277.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|222423282|dbj|BAH19617.1| AT1G07480 [Arabidopsis thaliana] [NCBI NR]
  • pir||T51333 transcription factor IIA large chain [validated] - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 375 amino acids

    Gene Ontology:
    Cellular Component: transcription factor TFIIA complex [IEA]
    Biological Process: transcription [ISS]
    transcription initiation from RNA polymerase II promoter [IEA]
    Molecular Function: transcription factor activity [ISS]
    RNA polymerase II transcription factor activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTTTTTSAV YIHVIEDVVN KVREEFINNG GPGESVLSEL QGIWETKMMQ AGVLNGPIER  60
   61 SSAQKPTPGG PLTHDLNVPY EGTEEYETPT AEMLFPPTPL QTPLPTPLPG TADNSSMYNI 120
  121 PTGSSDYPTP GTENGVNIDV KARPSPYMPP PSPWTNPRLD VNVAYVDGRD EPERGNSNQQ 180
  181 FTQDLFVPSS GKRKRDDSSG HYQNGGSIPQ QDGAGDAIPE ANFECDAFRI TSIGDRKVPR 240
  241 DFFSSSSKIP QVDGPMPDPY DEMLSTPNIY SYQGPSEEFN EARTPAPNEI QTSTPVAVQN 300
  301 DIIEDDEELL NEDDDDDELD DLESGEDMNT QHLVLAQFDK VTRTKSRWKC SLKDGIMHIN 360
  361 DKDILFNKAA GEFDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] FFAS03 3.36 Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex
    2 View Details [75..288] PSI-BLAST 6.0 Sec24
    3 View Details [289..375] PSI-BLAST 21.69897 Structure of a Yeast TFIIA/TBP/TATA-box DNA Complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle