Protein Overview: LYM3_ARATH

General Information:
Name(s) found:	LYM3_ARATH [Swiss-Prot]
Description(s) found: SHOW ONLY BEST	gi\|75223282\|sp\|Q6NPN4.1\|LYM3_ARATH RecName: Full=LysM domain-containing GPI-anchored protein 2; Flags: Precursor [NCBI NR] gi\|51971735\|dbj\|BAD44532.1\| predicted GPI-anchored protein [Arabidopsis thaliana] [NCBI NR] gi\|38603836\|gb\|AAR24663.1\| At1g77630 [Arabidopsis thaliana] [NCBI NR] gi\|30699276\|ref\|NP_177886.2\| peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] [NCBI NR] LysM domain-containing GPI-anchored protein 2 OS=Arabidopsis thaliana GN=LYM3 PE=1 SV=1 [Swiss-Prot] At1g77630 [Arabidopsis thaliana]gi\|51971735\|dbj\|BAD44532.1\| predicted GPI-anchored protein [Arabidopsis thaliana]gi\|30699276\|ref\|NP_177886.2\| peptidoglycan-binding LysM domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas] Tax_Id=3702 Peptidoglycan-binding LysM domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta] \| Symbols: \| peptidoglycan-binding LysM domain-containing protein \| chr1:29178620-29180281 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta] LysM domain GPI-anchored protein 3 precursor [nr-271106-contam.fasta] predicted GPI-anchored protein [Arabidopsis thaliana] [nr-271106-contam.fasta] At1g77630 [Arabidopsis thaliana] [nr-271106-contam.fasta] unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta] \| Symbols: \| Peptidoglycan-binding LysM domain-containing protein \| chr1:29173726-29175387 FORWARD LENGTH=423 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
Organism:	Arabidopsis thaliana
Length:	423 amino acids
Gene Ontology:
Cellular Component:	plasma membrane [IDA] anchored to membrane [TAS] anchored to plasma membrane [IDA]
Biological Process:	cell wall macromolecule catabolic process [IEA][ISS]
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNPEKPLLL FLILASSLAS MATAKSTIEP CSSKDTCNSL LGYTLYTDLK VTEVASLFQV  60
   61 DPVSMLLSNS IDISYPDVEN HVLPAKLFLK IPITCSCVDG IRKSLSTHYK TRTSDTLGSI 120
  121 ADSVYGGLVS PEQIQVANSE TDLSVLDVGT KLVIPLPCAC FNGTDESLPA LYLSYVVRGI 180
  181 DTMAGIAKRF STSVTDLTNV NAMGAPDINP GDILAVPLLA CSSNFPKYAT DYGLIIPNGS 240
  241 YALTAGHCVQ CSCVLGSRSM YCEPASISVS CSSMRCRNSN FMLGNITSQQ SSSGCKLTTC 300
  301 SYNGFASGTI LTTLSMSLQP RCPGPQQLAP LIAPPDNVPK ELMYLPSPSP SPSPEFDDIA 360
  361 GGGSSIAAVP AASPGGATVS SSNSIPGNPA NGPGGSISIA SCPLSYYSFI ALLIPIGSCF 420
  421 FVF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..94]	PSI-BLAST	4.522879	No description for 2djpA was found.
2	View Details	[95..155]	FFAS03	3.29	No description for 2djpA was found.
3	View Details	[156..301]	PSI-BLAST	4.0	Crystal Structure of the B. subtilis YkuD protein at 2 A resolution
4	View Details	[302..423]	FFAS03	1.04	Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP

Protein Overview: LYM3_ARATH

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: