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Protein Overview: gi|110736352, gi...

General Information:
Name(s) found: gi|79315331 [NCBI NR]
gi|45592922 [NCBI NR]
gi|38564304 [NCBI NR]
gi|30694465 [NCBI NR]
gi|110736352 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|79315331|ref|NP_001030873.1| TBP-binding protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|45592922|gb|AAS68115.1| At3g56510 [Arabidopsis thaliana] [NCBI NR]
  • gi|38564304|gb|AAR23731.1| At3g56510 [Arabidopsis thaliana] [NCBI NR]
  • gi|30694465|ref|NP_191210.2| TBP-binding protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|110736352|dbj|BAF00145.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: nucleic acid binding [IEA]
    TATA-binding protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSEESHELT DGISEEKESK ETMKSQKADR KKKKLKEKLL KEASKADNRG VCYLSRIPPH  60
   61 MDHVRLRHIL AQYGELGRIY LAPEDSEAQV HRKRAGGFRG QRFSEGWVEF AKKSVAKRVA 120
  121 DMLNGEQIGG KKKSSVYYDI WNIKYLTKFK WDDLTEEIAY KSAIREQKLN MVLSAAKREK 180
  181 DFYLSKIEKS RAMTEIDARM EKKRKIQEES GSNAEAAPVF PPRAIFQFRQ KKSIENETSQ 240
  241 SKPGLSTDFL ASVFGGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 25.39794 Hu antigen D (Hud)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle