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Protein Overview: gi|23497781, gi|...

General Information:
Name(s) found: gi|23509928 [NCBI NR]
gi|23497781 [NCBI NR]
gi|124810439 [NCBI NR]
Description(s) found:
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  • gi|23509928|ref|NP_702595.1| hypothetical protein PF14_0706 [Plasmodium falciparum 3D7] [NCBI NR]
  • gi|23497781|gb|AAN37319.1| conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] [NCBI NR]
  • gi|124810439|ref|XP_001348880.1| hypothetical protein [Plasmodium falciparum 3D7] [NCBI NR]
  • hypothetical protein [Plasmodium falciparum 3D7]gi|23497781|gb|AAN37319.1| hypothetical protein [Plasmodium falciparum 3D7] [nrdb_11152004_Chlamydomonas]
  • hypothetical protein PF14_0706 [Plasmodium falciparum 3D7] [nr-271106-contam.fasta]
  • conserved Plasmodium protein, unknown function [Plasmodium falciparum 3D7] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
  • | organism=Plasmodium_falciparum_3D7 | product=nucleoporin NUP116/NSP116, putative (NUP116) | location=Pf3D7_14_v3:2998594-3002355(-) | length=1253 | sequence_SO=chromosome | SO=protein_coding | source=plasmodb [plasmo.nopseudogenes.fwdrev.fasta]
    • Organism: Plasmodium falciparum 3D7
    Length: 1253 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRKLSNVIT SNKGNSMELF VNVLNWAIPK TEVNEMLKKY NVVSLECFVK NYRIYKADKM  60
   61 RNILSAVVGI VVKKHFKCVI LKKSYFLQWD ISDFMGNVVS VYVNINKHTN IEFIEEGNLV 120
  121 ILVNPDIHRR NEYSGDESID FYNLHDIINV GKVAYMHKCK ARNIYNDTCP YLLYVPRQGY 180
  181 FCSHHIGSQS RSQSYSADEG KNCLVFEFPI IHNTEEDSTE EDNTEEQNKR RHNAKEDNTQ 240
  241 KFSHSTHKLH ANSLIKPIPC KKTNFKNSNH LDNDMLSEYN LNANYDSTSD SIHFYESLSE 300
  301 RNDTNFLSSS KEKSKQNPLQ LSRETVRVQK PFEGKNEINK PSDEFCYVHQ SLYELNKLRN 360
  361 RSDQAYIAHN TSSRKFGAQN MSGGTYQAQN TSGGMYEAQN TSGGIYGAQN TLRETYGAQN 420
  421 TSGGIYQAQN TSGGMYEAQN TSGGIYGAQN TLRETYGAQN TSGGIYGAQN TSGGIYGAQN 480
  481 TLRETYGAQN TSSGTYQPQN TSSGTYQPQN TSSGTYRPQN TSSGTYQPQN TSSGAYQPQN 540
  541 TSSGTYQPQN TSSGTYQPQN TSSGTYQPQN TSSGTYQPQN TSSGTYQPQN TSSGTYQPQN 600
  601 TSSGTYQPQN TSSGTYQPQN TSSGTYQPQN TSSGTYQPQN TSSGIYGTQN MSSGINGTKN 660
  661 MSSGIYGTQN MSSGIYGAHK SCDGTNRMLK SLNREKKVDN LSYIKNILQQ QLFPKEKTGE 720
  721 SLSYMNQIQK LPFKRSRIIH TSDAIKEIVQ PHQRKKLVEK KGCEKNEVEK KGCEKNEVEK 780
  781 KGCEKNEVEK KGCEKNEVEK KGCEKNEVEK KGCENKGCEN KGCEKNEVEN KGCEKNEVEN 840
  841 KGCENKGCEK KEVEKKGCEN KGCENKGCEK NEVEKKGCEN KGCEKNEVEK KGCEKKEVEK 900
  901 KGCENKGCEK KEVEKKGCEN KGCEKNEVEK TSYEQNEVEK TSYEQKEILQ LLQKFNKLFQ 960
  961 KRSSKDHKMK RKRGREEDDN KYSSDSFIKR KKCSKMNPHN AREGGCGTYL KTEDKYGKMN1020
 1021 IFINGNKMNQ NKQLLPENEE RKVKNILDEN KKEIDKKSTN YDVYNDLNNC GHKNVICIEC1080
 1081 LNRYRRKNDS AENSNECGKH IYGEEKKTED NIKTVILDCA RENDIEIDMG EEIKNNEKFI1140
 1141 DASVGYENKL NTNGNEENTE TLYLMRPFHA ILNEIENAEK EGEKGIDKIV MNIKNITRNF1200
 1201 IYYADDFKNT RIIKICERLM LHKSMYIAIL ALDLRRKIGN LKENQEVETN VQI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..135] deduced N/A No confident structure predictions are available.
    2 View Details [136..601] PSI-BLAST 7.30103 No description for 1y0fB was found.
    3 View Details [602..729] FFAS03 1.17 No description for 2j63A was found.
    4 View Details [730..1084] PSI-BLAST 34.39794 Heavy meromyosin subfragment
    5 View Details [1085..1253] PSI-BLAST 13.045757 No description for 2dfsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle