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Protein Overview: gi|115434266, gi...

General Information:
Name(s) found: gi|34895462 [NCBI NR]
gi|215740913 [NCBI NR]
gi|14090380 [NCBI NR]
gi|12328526 [NCBI NR]
gi|115434266 [NCBI NR]
gi|113531422 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|34895462|ref|NP_909074.1| unknown protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215740913|dbj|BAG97069.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|14090380|dbj|BAB55538.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|12328526|dbj|BAB21184.1| P0044F08.14 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115434266|ref|NP_001041891.1| Os01g0125600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113531422|dbj|BAF03805.1| Os01g0125600 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 420 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTKDEDFKLV KIQTHVLRVN IHCDGCKHKV KKLLQKIEGV YSVALDVDNH KVTVTGNVDS  60
   61 DTLIRKLTRG GKHAELWSQQ KGGSNQGHKG SNNQQKQQQQ QGQQQHGQQH QKQGANPSKD 120
  121 GNKNNNILKD QGKQGGVGGL IQGLKAFKNQ HSKNQLPELD SEDDDLYDDE DDEFDDDYED 180
  181 DLRFLGDKMS QLGFLRQQAA AAAAANVKNK NANTATVNNH HNNVNGKKGG GGGGSAGGGN 240
  241 HHQNNHHQNQ KNPNVINMAA ANAKMANGAQ KNTGAINGMM GLNHGLGTAG ATPGFQGYTG 300
  301 FNHPSYASAG YGGLQQQHLQ QQQQSNNLMA SMQGYHHHPA ATAAMMNNLR GLNNNMMMMH 360
  361 QPQQQPQMMY HRSPQISPYT AYYNPYSYYY HPGAAGYHPA SNGDVETMFS DENTKGCVVM 420
  421

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..245] PSI-BLAST 20.0 Copper chaperone for superoxide dismutase, C-terminal domain; Copper chaperone for superoxide dismutase, N-terminal domain
    2 View Details [246..420] MSA 61.525997 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.246147507070597 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.0917283684559798 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle