YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|22124086, gi|...

General Information:
Name(s) found: gi|22124086 [NCBI NR]
gi|21956835 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|22124086|ref|NP_667509.1| PTS system enzyme IIBC [Yersinia pestis KIM] [NCBI NR]
  • gi|21956835|gb|AAM83760.1|AE013616_6 PTS system enzyme IIBC [Yersinia pestis KIM] [NCBI NR]
  • PTS system, trehalose-specific IIBC component [Yersinia pestis CO92]gi|45443577|ref|NP_995116.1| PTS system, trehalose-specific IIBC component [Yersinia pestis biovar Medievalis str. 91001]gi|22124086|ref|NP_667509.1| PTS system enzyme IIBC [Yersinia pe [nrdb_11152004_Chlamydomonas]
  • PTS system enzyme IIBC [Yersinia pestis KIM] [nr-271106-contam.fasta]
    • Organism: Yersinia pestis KIM10+
    Length: 483 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRARNLYGKD DKMGKVKQQD IDQLIVLVGG RENIATVSHC ITRLRFVLKD PSIASPKEIE  60
   61 NLSMVKGCFT NAGQFQVVIG PEVDDYYKAL IAKIGQSEVD KEQTKLAARQ NMTWFERGIS 120
  121 HFAEIFFPLL PALISGGLIL GFRNVIGDIP MSEGKTLAQM YPAWQTIYDF LWLLGEAIFF 180
  181 YLPVAICWST VKKMGGTPVL GIVLGITLVS PQLMNSYLLG QQLPDVWNFG WFTIEKVGYQ 240
  241 AQVIPSILAG LALGWIETNL KRIIPAYLYL VVVPVVSLLL AVFLAHTLIG PFGRMIGDGV 300
  301 AWGVKAVMTG SFAPVGAALF GFLYAPLVIT GVHQTTLAID MQMVQSMGGT PVWPLIALSN 360
  361 IAQASAVLGI IIISRKINER EISVPAAISA YLGVTEPAMY GINLKYRFPM LCAMIGSALA 420
  421 GLICGLTGVM ANGIGVGGLP GILSIQPQFW GIYAVAMLVA IVVPLALTIL VYKRKERRGE 480
  481 LPV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] PSI-BLAST 13.221849 Glucose permease domain IIB
    2 View Details [97..309] MSA 2.535991 View MSA. No confident structure predictions are available.
    3 View Details [310..483] MSA 9.538991 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.61117010765727 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle