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Protein Overview: EX7S_ECOLI

General Information:
Name(s) found: EX7S_ECOLI [Swiss-Prot]
Description(s) found:
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  • pir||JQ0664 exodeoxyribonuclease VII (EC 3.1.11.6) small chain - Escherichia coli (strain K-12) [NCBI NR]
  • gi|67462835|sp|P0A8G9.2|EX7S_ECOLI RecName: Full=Exodeoxyribonuclease 7 small subunit; AltName: Full=Exodeoxyribonuclease VII small subunit; Short=Exonuclease VII small subunit [NCBI NR]
  • pir||H85538 exonuclease VII, small subunit [imported] - Escherichia coli (strain O157:H7, substrain EDL933) [NCBI NR]
  • pir||D90688 exonuclease VII small subunit [imported] - Escherichia coli (strain O157:H7, substrain RIMD 0509952) [NCBI NR]
  • gi|216583|dbj|BAA00598.1| unnamed protein product [Escherichia coli] [NCBI NR]
  • gi|209744012|gb|ACI70313.1| exonuclease VII small subunit [Escherichia coli] [NCBI NR]
  • gi|209744010|gb|ACI70312.1| exonuclease VII small subunit [Escherichia coli] [NCBI NR]
  • gi|209744008|gb|ACI70311.1| exonuclease VII small subunit [Escherichia coli] [NCBI NR]
  • gi|209744006|gb|ACI70310.1| exonuclease VII small subunit [Escherichia coli] [NCBI NR]
  • gi|209744004|gb|ACI70309.1| exonuclease VII small subunit [Escherichia coli] [NCBI NR]
  • gi|1773106|gb|AAB40178.1| exodeoxyribonuclease small subunit [Escherichia coli] [NCBI NR]
  • Exodeoxyribonuclease 7 small subunit (EC 3.1.11.6) (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit) - Escherichia coli [Swiss-Prot]
  • exonuclease VII, small subunit [Escherichia coli K12]gi|15829730|ref|NP_308503.1| exonuclease VII small subunit [Escherichia coli O157:H7]gi|30061916|ref|NP_836087.1| exonuclease VII, small subunit [Shigella flexneri 2a str. 2457T]gi|26246428|ref|NP_75 [nrdb_11152004_Chlamydomonas]
  • Exodeoxyribonuclease 7 small subunit (Exodeoxyribonuclease VII small subunit) (Exonuclease VII small subunit) [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • exodeoxyribonuclease small subunit [Escherichia coli] [nr-271106-contam.fasta]
  • unnamed protein product [Escherichia coli] [nr-271106-contam.fasta]
  • Exodeoxyribonuclease 7 small subunit OS=Escherichia coli (strain K12) GN=xseB PE=1 SV=2 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 80 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKKNEAPAS FEKALSELEQ IVTRLESGDL PLEEALNEFE RGVQLARQGQ AKLQQAEQRV  60
   61 QILLSDNEDA SLTPFTPDNE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] PSI-BLAST 14.0 Crystal structure of Exodeoxyribonuclease VII small subunit (NP_881400.1) from Bordetella pertussis at 2.40 A resolution


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle