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Protein Overview: gi|55741362

General Information:
Name(s) found: gi|55741362 [NCBI NR]
Description(s) found:
  • ref|XP_550346.1| putative early nodule-specific-like protein ENOD8 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: SPECIES UNKNOWN
    Length: 227 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLKQLEGLL GDLQQFTAPK VELEQYATGP HIASRMLYTA ENSFDDITGK VVADFGCGCG  60
   61 TLSVASSLLD AEHVVGIDID PQSLELAQEN AADLELDIDL IQCDIKNLNL RGLLVDTVVM 120
  121 NPPFGTSRKG ADMEFISMGM KVATRAVYSL HKTSTREHIK KVALRNCNAI SAEVLCELRY 180
  181 NLPRTYKFHK QNEVDIAVDF WRFVPRARDE GSTACSVTNL KQRRMHR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 25.221849 crystal structure of a putative RNA methyltransferase PH1948 from Pyrococcus horikoshii

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  0.444447673749491 bayes_pls_golite062009
  • catalytic activity
    		•  0.352837241386487 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.0533354664784367 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.0416815045255102 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle