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Protein Overview: gi|16504807, gi|...

General Information:
Name(s) found: gi|25285574 [NCBI NR]
gi|16504807 [NCBI NR]
Description(s) found:
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  • gi|25285574|pir||AB0960 probable cytochrome-c peroxidase (EC 1.11.1.5) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) [NCBI NR]
  • gi|16504807|emb|CAD03174.1| probable cytochrome c peroxidase [Salmonella enterica subsp. enterica serovar Typhi] [NCBI NR]
  • probable cytochrome c peroxidase [Salmonella enterica subsp. enterica serovar Typhi Ty2]gi|16767105|ref|NP_462720.1| putative cytochrome c peroxidase [Salmonella typhimurium LT2]gi|16762502|ref|NP_458119.1| probable cytochrome c peroxidase [Salmonella e [nrdb_11152004_Chlamydomonas]
  • probable cytochrome c peroxidase [Salmonella enterica subsp. enterica serovar Typhi] [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • probable cytochrome-c peroxidase (EC 1.11.1.5) [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) [nr-271106-contam.fasta]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi
    Length: 466 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKITLYATT VITVGLLCYL GLSGYVWYYD KQRSKKSDVQ ASVVGENNKI LGYFREKGCD  60
   61 YCHTPSAELP FYSSFPVAKQ LMDYDIQLGY KSFNLEAVRA ALIADTPVPQ SELNKIEWVM 120
  121 QHQTMPPTRY VALHWAGGVS DKERTDILNW IADQRERNYA SADTDPAHRN EPVQPIPRNI 180
  181 PVDAKKVDLG FRLYHDERLS GDSTISCAHC HALNAGGVDG RKTSIGVGGA VGPINAPTVF 240
  241 NSVFNIEQFW DGRAATLQEQ AGGPPLNPIE MASKSWDEII SKLDKDPVLK KDFQAVYPQG 300
  301 FTGENITDAI AEFEKTLITP DSAFDKWLRG DENALTAQQK HGYQLFKENK CATCHGGIIL 360
  361 GGRSFEPLGL KRDFNFGEIT AADIGRMNVT KEVRDKLRQK VPGLRNVALT APYFHRGDVP 420
  421 TLDGAVKLML RYQVGTDLPQ NDIDDIVAFL ESLTGVYTPY QPEYAQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] FFAS03 1.73 Photosystem II from Thermosynechococcus elongatus
    2 View Details [159..466] PSI-BLAST 108.0 Di-heme cytochrome c peroxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peroxidase activity
    		•  1.75209676626315 bayes_pls_golite062009
  • oxidoreductase activity, acting on peroxide as acceptor
    		•  1.75209676626315 bayes_pls_golite062009
  • antioxidant activity
    		•  1.56037732185826 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.688831040524478 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle