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Protein Overview: gi|16504718, gi|...

General Information:
Name(s) found: gi|25512571 [NCBI NR]
gi|16504718 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|25512571|pir||AE0948 probable glycosyl hydrolase STY3859 [imported] - Salmonella enterica subsp. enterica serovar Typhi (strain CT18) [NCBI NR]
  • gi|16504718|emb|CAD09607.1| putative glycosyl hydrolase [Salmonella enterica subsp. enterica serovar Typhi] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi
    Length: 678 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSLPQRSTD FELTTSQDGF ALSWQQRLIL RHSAENPCLW IGAGVADIDM FRGNFSIKDK  60
   61 LNEKIALTEA TVSELPDGWL VQFSRGATIS ATLRISADEA GRLTLDLQND DLHHNRIWLR 120
  121 LAANPDDHIY GCGEQFSYFD LRGKPFPLWT SEQGVGRNKT SYVTWQADCK ENAGGDYYWT 180
  181 FFPQPTFVST QKYYCHVDNS CYMNFDFSAP EYHELALWED KTTLRFECAD TYIALLEKLT 240
  241 ALLGRQPELP DWVYDGVTLG IQGGTEVCQQ KLDTMRNAGV KVNGIWAQDW SGIRMTSFGK 300
  301 RVMWNWKWNS DNYPQLDSRI KQWKEEGVQF LSYINPYVAS DKDLCAEAAR HGYLAKDATG 360
  361 GDYLVEFGEF YGGVVDLTNP EAYDWFKDVI KKNMIALGCS GWMADFGEYL PTDTYLHNGV 420
  421 SAEIMHNAWP ALWAKCNYEA LQETGKLGEI LFFMRAGYTG SQKYSTMMWA GDQNVDWSLD 480
  481 DGLASVVPAA LSLAMTGHGL HHSDIGGYTT LFDMKRSKEL LLRWCDFSAF TPMMRTHEGN 540
  541 RPGNNWQFDG DAETIAHFAR MTTVFTTLKP YLKQAVAQNA ATGLPVMRPL FLHYENDAAT 600
  601 YTLKYQYLLG QDLLVAPVHE QGRCDWTLYL PEDHWVNIWT GEAHHGGEIT VDAPIGKPPV 660
  661 FYRAKSEWAL LFASLRNI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..109] deduced N/A No confident structure predictions are available.
    2 View Details [110..678] PSI-BLAST 122.0 Crystal Structure of Alpha-Xylosidase from Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity, acting on glycosyl bonds
    		•  3.1190602686215 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  2.98773241907716 bayes_pls_golite062009
  • catalytic activity
    		•  2.22613067995402 bayes_pls_golite062009
  • hydrolase activity
    		•  1.107656067558 bayes_pls_golite062009
  • trehalase activity
    		•  0.8585169360333 bayes_pls_golite062009
  • glucosidase activity
    		•  0.58717079348538 bayes_pls_golite062009
  • alpha,alpha-phosphotrehalase activity
    		•  0.478490799601761 bayes_pls_golite062009
  • hexosaminidase activity
    		•  0.16438321606077 bayes_pls_golite062009
  • amylase activity
    		•  0.0914002140078796 bayes_pls_golite062009
  • alpha-amylase activity
    		•  0.0521244165288097 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle