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Protein Overview: gi|16760892

General Information:
Name(s) found: gi|16760892 [NCBI NR]
Description(s) found:
Found 3 descriptions.
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  • gi|16760892|ref|NP_456509.1| excinuclease ABC subunit C [Salmonella enterica subsp. enterica serovar Typhi str. CT18] [NCBI NR]
    • Organism: Salmonella enterica subsp. enterica serovar Typhi str. CT18
    Length: 610 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEIFDAKAF LKTVTSQPGV YRMYDAGGTV IYVGKAKDLK KRLSSYFRSN LASRKTEALV  60
   61 AQIQHIDVTV THTETEALLL EHNYIKLYQP RYNVLLRDDK SYPFIFLSGD THPRLAMHRG 120
  121 AKHAKGEYFG PFPNGYAVRE TLALLQKIFP IRQCENSVYR NRSRPCLQYQ IGRCLGPCVA 180
  181 GLVSEEEYTQ QVEYVRLFLS GKDDQVLTQL IARMEKASQD LAFEEAARIR DQIQAVRRVT 240
  241 EKQFVSNAGD DLDVIGVAFD AGMACVHVLF IRQGKVLGSR SYFPKVPGGT ELGEVVETFV 300
  301 GQFYLQGSQM RTLPGEILLD FNLSDKTLLA DSLSELAGRR IHVQTKPRGD RARYLKLART 360
  361 NAATALVTKL SQQSTITQRL TALATVLKLP AIKRMECFDI SHTMGEQTVA SCVVFDANGP 420
  421 LRAEYRRYNI AGITPGDDYA AMNQVLRRRY GKAIEESKIP DVILIDGGKG QLAQAKAVFA 480
  481 ELDVPWDKHR PLLLGVAKGA DRKAGLETLF FEPEGEGFSL PPDSPALHVI QHIRDESHDH 540
  541 AIGGHRKKRA KVKNTSTLET IEGVGPKRRQ MLLKYMGGLQ GLRNASVEEI AKVPGISQGL 600
  601 AEKIFWSLKH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] PSI-BLAST 28.69897 Crystal structure of the GIY-YIG N-terminal endonuclease domain of UvrC from Bacillus caldotenax
    2 View Details [123..242] FFAS03 2.22 C-terminal UvrC-binding domain of UvrB
    3 View Details [243..338] MSA 2.298987 View MSA. Confident ab initio structure predictions are available.
    4 View Details [339..610] PSI-BLAST 53.09691 No description for 2nrtA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle