YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CERK_ARATH

General Information:
Name(s) found: CERK_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|42568457|ref|NP_568756.2| ceramide kinase-related [Arabidopsis thaliana] [NCBI NR]
  • gi|34223322|gb|AAQ62904.1| ceramide kinase [Arabidopsis thaliana] [NCBI NR]
  • Ceramide kinase OS=Arabidopsis thaliana GN=CERK PE=1 SV=1 [Swiss-Prot]
  • ceramide kinase [Arabidopsis thaliana]gi|42568457|ref|NP_568756.2| ceramide kinase-related [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ceramide kinase-related [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ceramide kinase-related | chr5:20861478-20865383 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • ceramide kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • diacylglycerol kinase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Diacylglycerol kinase family protein | chr5:20844252-20848157 REVERSE LENGTH=608 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Ceramide kinase OS=Arabidopsis thaliana GN=CERK PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 608 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: activation of protein kinase C activity by G-protein coupled receptor protein signaling pathway [IEA]
    Molecular Function: diacylglycerol kinase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEGRDDEYC SFSNSGDRDG GLSGCFFLDH VGQVLLSRNH DGLSWKCLDS SDCEGTTCLG  60
   61 IIICENSETE IKFSDIYAVE FVSYGLVHSP KLGLRHAKEC FRERLLNTQE MYRFTVHGFQ 120
  121 SSPKEPCLWN LAAFTFGHMD LQTCQSWMDQ LNYSLIKEVE RPRNLLVFVH PKSGKGNGSK 180
  181 VWETVSKIFI RAKVNTKVIV TERAGHAFDV MASIQNKELH TYDGIIAVGG DGFFNEILNG 240
  241 YLLSRLKVPL PPSPSDSFNS VQSRGSSSVP EPGDEVHETD QKEHYPLLPD SVQEVMNFRT 300
  301 VNGSCEGIED PDHPFSSERP RFGLIPAGST DAIVMCTTGA RDPVTSALHI ILGRKLFLDA 360
  361 MQVVRWKTAS TSTIEPYIRY AASFAGYGFY GDVISESEKY RWMGPKRYDY VGTKIFLKHR 420
  421 SYEAEVMFEE AESENSKASL HTRSKTWPFR NTTRSEKILC RANCKICNSK VGWNSASTTL 480
  481 NPCPEKTRWC RTKGRFLSIG AAVMSNRNER APDGLVVDAH LSDGFLHLIL IKDCSRPKYL 540
  541 WHLTELAKRG GEPLNFEFVE YHKTRAFTFT SFGEESVWNL DGEIFEAHQL SAQVLRGLIP 600
  601 LFASGPEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..105] PSI-BLAST 14.0 Solution Structure of The C1 Domain of The Human Diacylglycerol Kinase Delta
    2 View Details [106..246] MSA 2.344994 View MSA. No confident structure predictions are available.
    3 View Details [247..508] PSI-BLAST 20.221849 No description for 2bonA was found.
    4 View Details [509..608] FFAS03 2.28 No description for 2bonA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0980674097362609 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle