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Protein Overview: gi|113624403, gi...

General Information:
Name(s) found: gi|50948261 [NCBI NR]
gi|42408731 [NCBI NR]
gi|42407550 [NCBI NR]
gi|215706910 [NCBI NR]
gi|125604240 [NCBI NR]
gi|115477677 [NCBI NR]
gi|113624403 [NCBI NR]
Description(s) found:
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  • gi|50948261|ref|XP_483658.1| putative RING-H2 finger protein RHG1a [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42408731|dbj|BAD09949.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group] [NCBI NR]
  • gi|42407550|dbj|BAD10755.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215706910|dbj|BAG93370.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125604240|gb|EAZ43565.1| hypothetical protein OsJ_28186 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115477677|ref|NP_001062434.1| Os08g0548300 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113624403|dbj|BAF24348.1| Os08g0548300 [Oryza sativa Japonica Group] [NCBI NR]
  • putative RING-H2 finger protein RHG1a [Oryza sativa (japonica cultivar-group)]gi|42408731|dbj|BAD09949.1| putative RING-H2 finger protein RHG1a [Oryza sativa (japonica cultivar-group)]gi|42407550|dbj|BAD10755.1| putative RING-H2 finger protein RHG1a [Or [nrdb_11152004_Chlamydomonas]
  • Os08g0548300 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative RING-H2 finger protein RHG1a [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 305 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDAAKDTTAA AADQNPTPNP PTAAAPPDDS AAAAAAGRRP FTSLTQEEAD LALARVLQEQ  60
   61 ERAYMMLSAH HGGDYAASDG GSYEFDEEGE GSDFEDEDGD GDGDGEALDE DEEVADADAD 120
  121 AAGDPAELDP ARYEDDEAFA RALQDAEERE VAGRLMALAG LSDWRVMDHD DDDVDDDDDE 180
  181 DDDDDDDDED EDGDDPQDAW EDVDPDEYSY EELVALGEVV GTESRGLSAD TLASLPSITY 240
  241 RAQDKQDGNM EQCVICRVEF EEGESLVALP CKHSYHSECI NQWLQLNKVC PMCSAEVPTS 300
  301 QDTRA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..223] deduced N/A No confident structure predictions are available.
    2 View Details [224..305] PSI-BLAST 12.045757 Solution structure of RING finger in RING finger protein 38


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle