YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|113624129, gi...

General Information:
Name(s) found: gi|50947329 [NCBI NR]
gi|42407752 [NCBI NR]
gi|215715260 [NCBI NR]
gi|115477128 [NCBI NR]
gi|113624129 [NCBI NR]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • gi|50947329|ref|XP_483192.1| zinc metalloproteinase-like [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42407752|dbj|BAD08898.1| zinc metalloproteinase-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215715260|dbj|BAG95011.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115477128|ref|NP_001062160.1| Os08g0500800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113624129|dbj|BAF24074.1| Os08g0500800 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 669 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEKRIARIS VTWRGRQLDV DADPSCTVKE FGQLLQDLTS VNPETLKLIV PQSTNKGSKL  60
   61 ITPFSDPHSV LTLKEAAISD GKPIRMMGVF NDEIEEVSDN GKRTDLRIIG FEEEEQRLRQ 120
  121 RTSGRPQVPL KLPQGQYIFC DFRTLHLPGI ELNPPPSEAL KRMHMLACDP GIIAIMNKHR 180
  181 WRVGIMTEMA PVGYVGVSPK CILGFNKNMG EEISLRLRTD DLKGFRKYES IKRTLLHELA 240
  241 HMVHSEHDAN FFALNKQLND EAASLDWTKS RGHVLSGRKI FDSYEDEFVL EPDSVVVGHK 300
  301 LGGGSSSLAS ARVLSGSAAY KRFLNASADL ESSKDSVTIP GNEILVPNTK FEPDPDDVGQ 360
  361 DFSQDNTKVE PDPDDNDDMN VDVGTGASWS SVSRSFTEQD TISHSEPDPD DIHQQSTAGC 420
  421 LEPDPDDSSN VDILSQELTI DGKQNGEPDP DDNGTSKFIP EPVNKMEVET ELGSNFAVQN 480
  481 SEPDPDDSSN AILNKKLGTD RSDETTCEAV VEECVNKMEV ETEQSRNSTM SKSEPDPDDH 540
  541 AANSNISELQ RIEEPVAALC ARLQKAIEML RSQATPTEAT SALQTLFKII KNVIEHPHDI 600
  601 KYRRLRKSNP QFQRSVANYK AAMEVLELIG FCEDVVSDEI GRAETYLVLK RNDPGLLWLA 660
  661 KASLEVSMA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..125] PSI-BLAST 21.221849 Solution Structure of the Ubiquitin-like Domain from Mouse Hypothetical 8430435I17Rik Protein
    2 View Details [126..324] Pfam 70.508638 No description for PF08325.1 was found. No confident structure predictions are available.
    3 View Details [325..566] FFAS03 1.31 THE BLUETONGUE VIRUS (BTV) CORE BINDS DSRNA
    4 View Details [567..669] PSI-BLAST 14.0 No description for 2hplA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.0934358341245259 bayes_pls_golite062009
  • protein binding
    		•  0.03789551947602 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle