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Protein Overview: gi|115476988, gi...

General Information:
Name(s) found: gi|50947033 [NCBI NR]
gi|42408177 [NCBI NR]
gi|222640760 [NCBI NR]
gi|215697255 [NCBI NR]
gi|115476988 [NCBI NR]
gi|113624059 [NCBI NR]
Description(s) found:
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  • gi|50947033|ref|XP_483044.1| unknown protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42408177|dbj|BAD09314.1| unknown protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222640760|gb|EEE68892.1| hypothetical protein OsJ_27725 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215697255|dbj|BAG91249.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115476988|ref|NP_001062090.1| Os08g0485700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113624059|dbj|BAF24004.1| Os08g0485700 [Oryza sativa Japonica Group] [NCBI NR]
  • unknown protein [Oryza sativa (japonica cultivar-group)]gi|42408177|dbj|BAD09314.1| unknown protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os08g0485700 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • unknown protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 885 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METEVFPVVD LRVLSQSDLE ALAAASAHAV APGGSCPDAD QLPPLKIDRA VFNESAGSRK  60
   61 QTFSRVRFGA AAAVAASPSS PSPSAAAKLP RGNDKEDSFI AYHLRRLFAP DDPSSPQIQT 120
  121 LALPAPPSPD PDQLTTNSKG VSVDLVSLSR LADPYDAELG KRTAGMTTEE ELMGFISSLA 180
  181 GQWVSQRMRR KLVDASFFGD HLPSGWRLQL GIKRKDRKAW VNCFSYVSPK GQSFATCQEV 240
  241 SAYLMSLLGY PEFKTDNIEY GSTQQHGLCA DDGVNVLGVQ HQIGTGMDSQ SILPVASITF 300
  301 SSHSRDQDET DADDINSYEC QQCNLTFHGQ SAYAHHLITF HKMGSKRRKI NKVGKFGEPV 360
  361 IGKDGKFECP VCNKTFEEQS RYFGHVGSHA KYHGLTPEAF LQTLSGKVGN DSFAGLSCSL 420
  421 QDLVGSPQLN EKTTASEARS QHHNCSTKHG GNSTRGIDLF NSNCPANFNG HNQTWCRPDE 480
  481 IPPTTDAPST WTYRNNVTNC ADRTVPRTAP QPNDHMDCRV SGFAEATNFN DQAGRHQGFR 540
  541 PSSFGTTNHC QGQIIDHAVA ASKHAEVNNS MKSRDVNLNS RLNTISFPIA TANNETSTAL 600
  601 NDVNRSCITG KGFSGSFSNN DGAASIVLPS SGLNNKIPSS LGVADRSSIA ARSFNAGYVN 660
  661 ENGASEANNI GNKNNTMVYQ TSLAMRPVSP CDLQLGFSGQ KQQILPGYGE LRPAASGSPQ 720
  721 LGGMAANSSI PTRPSQPQFG SMARTDALPT GPSQPGSLAR PNFVPTGFSQ FASRPPTSVP 780
  781 PADSSQFAGG MARQNIPTTS EPTLVLGYTP QMVNGPPAQL GWDLSLSRMV SEGMLPVLCI 840
  841 WCNSQFHHFG PIDAQQSGSF GFICPACKEK MSGNPNAPNN GPWQP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..229] deduced N/A No confident structure predictions are available.
    2 View Details [230..315] deduced N/A No confident structure predictions are available.
    3 View Details [316..483] deduced N/A No confident structure predictions are available.
    4 View Details [484..704] deduced N/A No confident structure predictions are available.
    5 View Details [705..781] deduced N/A No confident structure predictions are available.
    6 View Details [782..885] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle