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Protein Overview: gi|50945499, gi|...

General Information:
Name(s) found: gi|50945499 [NCBI NR]
gi|37572992 [NCBI NR]
Description(s) found:
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  • gi|50945499|ref|XP_482277.1| putative lateral organ boundaries (LOB) domain protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|37572992|dbj|BAC98684.1| putative lateral organ boundaries (LOB) domain protein [Oryza sativa Japonica Group] [NCBI NR]
  • putative lateral organ boundaries (LOB) domain protein [Oryza sativa (japonica cultivar-group)]gi|37572992|dbj|BAC98684.1| putative lateral organ boundaries (LOB) domain protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • putative lateral organ boundaries (LOB) domain protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 456 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTTTITTT NTTTTTTNNN NNPVSTTTTT TASHQRQSLP VAARPPHSSG SGSGSGGSHR  60
   61 GASGGGSGGG GGGGGGGGGG GGGTNQACAA CKYQRRKCNP DCPMAPYFPA DQQRRFLNAH 120
  121 RLFGVSNILK TLRHLKPELC DDAMRTLIYQ AEMRAHDPVG GCCRVICDLE RQLELDTAEL 180
  181 NTVLHHLAMC RQAAAAGASG SVAAALPAGV LDDACADLDV TSSNQPLLLS AEHEVVDALY 240
  241 ANQEADAAIL HADGHHNQDE SQREHHHGQP QQLYDYFYYD STAGDDVSSK PHLDINVDGM 300
  301 QHFDFDTNYD AEHKVELTSD HQMPVGVDEH NQIDDKGFEI KSGPSLVDVF DLRQEEEQVQ 360
  361 TVDVNTDIEV KEMVDMNADI DVKTMVDENS NIDIIKTMVD VNADIVDVVK TVVDVNGDIG 420
  421 VKEELPELDN GKIIAGDATQ MAESSHCRLG LGVSSF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] deduced N/A No confident structure predictions are available.
    2 View Details [82..198] Pfam 44.0 No description for PF03195.5 was found. No confident structure predictions are available.
    3 View Details [199..277] deduced N/A No confident structure predictions are available.
    4 View Details [278..343] deduced N/A No confident structure predictions are available.
    5 View Details [344..456] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle