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Protein Overview: gi|50940417, gi|...

General Information:
Name(s) found: gi|51964620 [NCBI NR]
gi|50940417 [NCBI NR]
gi|42408390 [NCBI NR]
gi|222639788 [NCBI NR]
gi|215694943 [NCBI NR]
gi|115474451 [NCBI NR]
gi|113622791 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|51964620|ref|XP_507094.1| PREDICTED P0007D08.37 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50940417|ref|XP_479736.1| putative shoot gravitropism 2 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42408390|dbj|BAD09541.1| putative shoot gravitropism 2 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222639788|gb|EEE67920.1| hypothetical protein OsJ_25787 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215694943|dbj|BAG90134.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115474451|ref|NP_001060822.1| Os08g0110700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113622791|dbj|BAF22736.1| Os08g0110700 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 937 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESPAARGAL GDDASGASTS QAAPGAVDGG ASPDSLRNTP SNIARLEDAI EHCAARRKYL  60
   61 ARTKSPSDGE DVRWYFCKLP LADKALSASV PRTEIVGKGD YFRFSMRDSL ALEASFLERE 120
  121 EALLAYWWRE YAECSEGPKG SLVAADASDS KSLYKVEEER VGVPVKGGLY EVDLMRRHCF 180
  181 PVYWNGENRR VLRGHWFARK GGLDWIPLRE DVSEQLELAY NCQVWHRRKF QPSGLFAARV 240
  241 DLQGSTPDLH ALFTGEDDTW EAWLVFDTGP KLGGNTIKLR RGFSSSGSAK PTQDELRQQK 300
  301 EEEMDDYCSQ VPVGHLVFMV HGIGQRLEKA NLVDDVVDFR RVTANLAERY LTPYQRSTQR 360
  361 VLFIPCQWRK SLKLSGEQSV EKITLDGVKG LRVALGATVH DVLYYMSPIY CQHIIDSVSN 420
  421 QLNQLYTKFI KRNPGYSGKV SIYGHSLGSV LSYDILCHQE SSSAPFPVDY MNMEVSSDEG 480
  481 HIAKSPDTVT AHESVMKEQD TSSISGHSCA DNVNDVVDEG STRTGTSCTE DTTLPTCALE 540
  541 NSPKLTTDAL PTAVDGEQIE VEKQVDNHKI ACSEEGDNSS VRAKDIDSCI ISRSAEGVHA 600
  601 DVPDKDTLIS SLKEEVERLK ARLAQLEQHN DLVTESSAES HQGKSATHAV NLSSGKNRIG 660
  661 QGSTSESYTP HIRYTKLNFK VDTFYAVGSP LGVFLSLRNV RIGIGRGQDY WQNENIVEEM 720
  721 PCCRQMFNIF HPFDPVAYRI EPLVCEDYIS KRPVIVPYHR GGKRIHVGVQ EFTEDIAARS 780
  781 QAVARQFKSL KVKAVAALLS LSRNDTDEDV DSNNEKEKSY GYMMMERLTG SPDGRIDHVL 840
  841 QEKTFQHPYL SALGSHTNYW RDHDTALFIL KHLYRDIPEE PPTDDPERMP IRLFYVRDPI 900
  901 AEETPLTFSD NSLVKEFSRK VRTYSRKSEN DSSCESS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] deduced N/A No confident structure predictions are available.
    2 View Details [71..298] MSA 3.093984 View MSA. No confident structure predictions are available.
    3 View Details [299..386] deduced N/A No confident structure predictions are available.
    4 View Details [387..580] MSA 2.118994 View MSA. No confident structure predictions are available.
    5 View Details [581..687] deduced N/A No confident structure predictions are available.
    6 View Details [688..876] Pfam 32.522879 No description for PF02862.9 was found. No confident structure predictions are available.
    7 View Details [877..937] MSA 1.05899 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle