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Protein Overview: gi|38344883, gi|...

General Information:
Name(s) found: gi|50929113 [NCBI NR]
gi|38344883 [NCBI NR]
gi|125591828 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50929113|ref|XP_474084.1| OSJNBa0033G05.7 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38344883|emb|CAD41906.2| OSJNBa0033G05.7 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125591828|gb|EAZ32178.1| hypothetical protein OsJ_16384 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 724 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDSAHKAQY IDGQREMFKR LDESSPRSSV PSEVGGRSTL KFSMPSFGYD SFNPVRSFLS  60
   61 GVRKGSGRLK SLRQSLTSGA PKTAFAEDLK SFKKTIFDPQ EKFLFQMNWF CFLSCVFAVA 120
  121 VDPLFFFLPI IDGDDKSSCI GIDKKLAVTS TIIRTILDLV YLIRVFLQFR TAYVAPSSRV 180
  181 FGTGELVIDP MRIAIRYLKS YFVMDFFALL PLPQIVVWRY LHTLDGPDVP STKNALVWVV 240
  241 LFQYIPRLLR IFPVTKDLKR TAGVFIETAW LGAAYYLLWF MLAGHNVGTL WYFLTIERED 300
  301 SCWRSNCHSN DGCNKSYLYC SDNHTGNYTS WLSKRTELLS ACSTNSFQFG IFEQALVSGI 360
  361 LRPGNFISKI CYCFWWGLQN LSTLGQGLQT SIYPGEVLFS IAICVIGLIL FALLIGNMQT 420
  421 YLQSVAIRLE EMRVKKRDAE QWMHHRSLPP QIRERVRRYE RYRWLETRGV DEENLVQTLP 480
  481 KDLRRDIKRH LCLGLVKRVP LFENMDERLL DAICERLRPT LYTENEYILR EGDPVDEMHF 540
  541 ILHGCLESET TDGGRSGFFN KVQLKEGAFC GDELLTWALD PKSAANFPAS TRTVKALTEV 600
  601 EAFALCAEEL KFVASQFRRL HSRQVQHTFR FYSQHWRTWA ACFIQAAWRR YYKRKMAEQH 660
  661 RKEEEAANRQ SSSSHHPSLA ATIYASRFAA NALRGVHRLR SRASPTIVRL PKPPEPDFAV 720
  721 DEAD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [85..225] FFAS03 1.56 Crystal structure of KvAP-33H1 Fv complex
    3 View Details [226..435] PSI-BLAST 4.0 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    4 View Details [436..504] FFAS03 2.34 No description for 2ptmA was found.
    5 View Details [505..652] PSI-BLAST 17.30103 Solution structure of the cNMP-binding domain from Arabidopsis thaliana cyclic nucleotide-regulated ion channel
    6 View Details [653..724] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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