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Protein Overview: gi|125591841, gi...

General Information:
Name(s) found: gi|50929141 [NCBI NR]
gi|38344897 [NCBI NR]
gi|32487348 [NCBI NR]
gi|125591841 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|50929141|ref|XP_474098.1| OSJNBa0033G05.21 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38344897|emb|CAD41920.2| OSJNBa0033G05.21 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|32487348|emb|CAE03170.1| OSJNBa0070O11.1 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125591841|gb|EAZ32191.1| hypothetical protein OsJ_16397 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 575 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFLVGLVLG IAAGVALIVG FARAENSRAA RRRQLAATIA SFSKMTIEDS RKLLPADLYP  60
   61 SWVVFSTQQK LKWLNQELIK IWPFVNAAAS ELIKTSVEPV LEQYRPIILA SLKFSKLTLG 120
  121 TVAPQFTGVS IIENDESGIV MELEMNWDAN PSIILDVKTR LGVSLPIQVK DIGFTGVFRL 180
  181 IFKPLVDQLP CFGAVCFSLR KKKKLDFRLK VIGGEISAIP GISDALEDTI KNAIEDSITW 240
  241 PVRKVIPIIP GDYSDLELKP VGTLEVKLVQ ARDLTNKDLI GKSDPFAIVY VRPLPDKMKR 300
  301 SKTINNDLNP IWNEHFEFIV EDADTQTVTV KIYDDDGIQE SELIGCAQVT LKDLQPGKVK 360
  361 DVWLKLVKDL EIQRDRKDRG QVHLELLYCP FDMKEETPNP FRQQFSMTSL ERTMTSMENG 420
  421 SGSNGFNRLS SRKKKEIIMR GVLSVTVISG EDLPAMDMNG KSDPYVVLSL KKSKTKYKTR 480
  481 VVSESLNPVW NQTFDFVVED GLHDMLMLEV YDHDTFSRDY MGRCILTLTK VLIEEDYKDS 540
  541 FKLEGAKSGK LNLHLKWSPQ PIFRDSREED SLRFR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] MSA 2.202994 View MSA. No confident structure predictions are available.
    2 View Details [163..246] PSI-BLAST 30.69897 Phosphoinositide-specific phospholipase C, isozyme D1 (PLC-D!); PI-specific phospholipase C isozyme D1 (PLC-D1), C-terminal domain; Phospholipase C isozyme D1 (PLC-D1)
    3 View Details [247..575] PSI-BLAST 48.221849 Synaptogamin I


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle