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Protein Overview: gi|222629686, gi...

General Information:
Name(s) found: gi|50929269 [NCBI NR]
gi|38343964 [NCBI NR]
gi|222629686 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|50929269|ref|XP_474162.1| OSJNBb0022F16.3 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38343964|emb|CAE01548.2| OSJNBb0022F16.3 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|222629686|gb|EEE61818.1| hypothetical protein OsJ_16445 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 492 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDMDTSHHYP WLNFSLAHHC EMEEEERGAA AELAAIAGAA PPPKLEDFLG GGCNGGSSGG  60
   61 ACPPVQTTAP TAAELYESEL KFLAAGFQLS GAAGAAPPVP ALLPAAALEQ TDETKQLALP 120
  121 PQAAVAPPPE QKKAVDSFGQ RTSIYRGVTR HRWTGRYEAH LWDNSCRREG QSRKGRQGGY 180
  181 DKEEKAARAY DLAALKYWGP STTTNFPVAE YEKELEEMKH MTRQEFVASL RRKSSGFSRG 240
  241 ASIYRGVTRH HQHGRWQARI GRVAGNKDLY LGTFGTEEEA AEAYDIAAIK FRGLNAVTNF 300
  301 EIGRYNVESI ISSNLPIGSM AGNRSTKAGL ELAPSSSADA IAATEANHTG VAPPSTLAFT 360
  361 ALPMKYDQAD YLSYLALQHH QQGNLQGLGF GLYSSGVNLD FANANGNGAM SNCYTNVSLH 420
  421 EQQQQHQHQH QQEQQQDQQD DQSQSSNNSC GSIPFATPIA FSGSYESSMT AAGTFGYYPN 480
  481 VAAFQTPIFG ME

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..111] deduced N/A No confident structure predictions are available.
    2 View Details [112..222] FFAS03 4.65 SOLUTION STRUCTURE OF THE GCC-BOX BINDING DOMAIN, NMR, MINIMIZED MEAN STRUCTURE
    3 View Details [223..301] PSI-BLAST 22.154902 GCC-box binding domain
    4 View Details [302..492] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.236830846471166 bayes_pls_golite062009
    3
    Term Confidence Notes
  • binding
    		•  0.339357445627225 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle