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Protein Overview: ADF2_ORYSJ

General Information:
Name(s) found: ADF2_ORYSJ [Swiss-Prot]
Description(s) found:
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  • gi|34897072|ref|NP_909882.1| putative actin-depolymerizing factor [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|222625904|gb|EEE60036.1| hypothetical protein OsJ_12808 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215706463|dbj|BAG93319.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|12957717|gb|AAK09235.1|AC084320_22 putative actin-depolymerizing factor [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115455697|ref|NP_001051449.1| Os03g0780400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113549920|dbj|BAF13363.1| Os03g0780400 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108711379|gb|ABF99174.1| Actin-depolymerizing factor 6, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • Actin-depolymerizing factor 2 OS=Oryza sativa subsp. japonica GN=ADF2 PE=2 SV=1 [Swiss-Prot]
  • putative actin-depolymerizing factor [Oryza sativa (japonica cultivar-group)]gi|12957717|gb|AAK09235.1| putative actin-depolymerizing factor [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Actin-depolymerizing factor 6, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Os03g0780400 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative actin-depolymerizing factor [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 145 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFMRSHSNA SSGMGVAPDI RDTFLELQMK KAFRYVIFKI EEKQKQVVVE KTGATTESYD  60
   61 DFLASLPEND CRYALYDFDF VTGENVQKSK IFFIAWSPST SRIRAKMLYS TSKDRIKQEL 120
  121 DGFHYEIQAT DPTEVDLEVL RERAH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..145] PSI-BLAST 43.39794 Cofilin (actin depolymerizing factor, ADF)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  7.52071741004022 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  6.04859625643932 bayes_pls_golite062009
  • actin filament binding
    		•  5.45532510538573 bayes_pls_golite062009
  • protein binding
    		•  2.93027234013365 bayes_pls_golite062009
  • binding
    		•  2.84811181543046 bayes_pls_golite062009
  • phosphatidylinositol-4,5-bisphosphate binding
    		•  1.3406661967545 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.482954032096802 bayes_pls_golite062009
  • structural molecule activity
    		•  0.391701411061931 bayes_pls_golite062009
  • actin monomer binding
    		•  0.224304003054399 bayes_pls_golite062009
  • receptor binding
    		•  0.0743355952407823 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle