YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|50918949, gi|...

General Information:
Name(s) found: gi|50918949 [NCBI NR]
gi|255674922 [NCBI NR]
gi|215769071 [NCBI NR]
gi|17027261 [NCBI NR]
gi|125588012 [NCBI NR]
gi|108711225 [NCBI NR]
Description(s) found:
Found 9 descriptions.
SHOW ALL
  • gi|50918949|ref|XP_469871.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|255674922|dbj|BAF13276.2| Os03g0762700 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215769071|dbj|BAH01300.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|17027261|gb|AAL34115.1|AC090713_2 hypothetical protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125588012|gb|EAZ28676.1| hypothetical protein OsJ_12687 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108711225|gb|ABF99020.1| expressed protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 303 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSRKLARV DIAELKQRLV KRLGRQRAGQ YFAHLTRLLN LKLTKVEFDK LCYATIGREN  60
   61 IALHNALIRG IISNALSGVP PPSRQAVTGQ SGTTTAPSGQ CVGIALQSAR NVGAVVDSGD 120
  121 GDFARERAVA GKVLSVEDGE EVEQVRSAPC VQSRSPITAP LGISTTPTYG ARTWRLDDPM 180
  181 VSCYDSHHLL DTGSLFKGLQ RRLESDGIGV SVQGVEVLNR GLDEFLRRLI KPCMELSRSR 240
  241 SSGRRVTKGN AMFAARMNGL QQANHGHCTT LQDFAVAMES DPHLLGTNWP TQLEKIQATS 300
  301 FGE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] MSA 2.033982 View MSA. No confident structure predictions are available.
    2 View Details [98..178] deduced N/A No confident structure predictions are available.
    3 View Details [179..303] FFAS03 1.11 TAF(II)-135, (TAF(II)-130, hTAF4), histone fold domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.455107270213523 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle