YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|48716513, gi|...

General Information:
Name(s) found: gi|50915968 [NCBI NR]
gi|48716513 [NCBI NR]
gi|48716271 [NCBI NR]
gi|125584186 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|50915968|ref|XP_468448.1| putative fibrillarin [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|48716513|dbj|BAD23118.1| putative fibrillarin [Oryza sativa Japonica Group] [NCBI NR]
  • gi|48716271|dbj|BAD22886.1| putative fibrillarin [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125584186|gb|EAZ25117.1| hypothetical protein OsJ_08915 [Oryza sativa Japonica Group] [NCBI NR]
  • putative fibrillarin [Oryza sativa (japonica cultivar-group)]gi|48716513|dbj|BAD23118.1| putative fibrillarin [Oryza sativa (japonica cultivar-group)]gi|48716271|dbj|BAD22886.1| putative fibrillarin [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • putative fibrillarin [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 306 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRPPRGRGFG RGGRGDGGGR SGGGGRGFGR GGDSGGRGGR GRGGGRTPRG RGGGRGGGRG  60
   61 GMKGGSKVVV VPHKHNGVFI AKAKEDALCT KNMVPGESVY GEKRISVQNE DGTKVEYRVW 120
  121 NPFRSKLAAA VLGGVDNIWI APGTRVLYLG AASGTTVSHV SDIVGPTGLV YAVEFSHRSG 180
  181 RDLVNMAKKR TNVIPIIEDA RHPARYRMLV GMVDVIFSDV AQPDQARILA LNASYFLKNG 240
  241 GHFVISIKAN CIDSTMPAEA VFASEVEKLK ADQFKPSEQV TLEPFERDHA CVVGGYRMPK 300
  301 KQKGTS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..65] FFAS03 0.958 Ribonuclease domain of colicin E3; Colicin E3 translocation domain; Colicin E3 receptor domain
    2 View Details [66..306] PSI-BLAST 58.69897 No description for 2ipxA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle