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Protein Overview: gi|115447455, gi...

General Information:
Name(s) found: gi|50910950 [NCBI NR]
gi|49388175 [NCBI NR]
gi|115447455 [NCBI NR]
gi|113537038 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|50910950|ref|XP_466908.1| transcription factor-like [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|49388175|dbj|BAD25301.1| transcription factor-like [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115447455|ref|NP_001047507.1| Os02g0633100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113537038|dbj|BAF09421.1| Os02g0633100 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1820 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDALVSAALE EVCARLSPGL PVTDLWPALR GALEAAGLSP GLDAKRVLWA RLIALPIISL  60
   61 VVGEGDGAPV DPVEKDVEEA ERRGVRLVAS AALRDNFLGM YDRRFAKSEL SAVQKGALER 120
  121 VGASRTSGVT QNDLCKTFRM KGNNFHFIVK SLQSQKLIVR QSTIIKVKDH GADAEDASQN 180
  181 KQIINTNSLY LSRYAKNLNM NSQQRIEIIK PELLGSNEES NGDVLQEDGA FGVNDKNDIS 240
  241 IHDYLPAMKA ICDKLEEASG KTLVVSDIKV DLNYRMTYGH RAWRNVLHRL RDAQLIEEFD 300
  301 AKVDDKPKST TSNYKLGKKG QATDQVMELP LENCIYDMIN AQGPKGITLV ELGKRLGHNN 360
  361 SKRLHKRVSS MLKKYNLTWE AEVQDKTSQY RVWTSKNFSH YKAGAALHNL EALPDDHEKC 420
  421 SDLWSLVPSK GSESPISRVD LFVDNNKLLL EEECHNKPAG HPLQSNHEAC VGVSQIVEQE 480
  481 KLALGQRKRR RCPPLTSDDR RHRRILHMLK KKKFVLKVEL HKWLEGLEKE NGKIMDRKTL 540
  541 TRTLNKLQEE GSCKCIKVSV PLVTDYTRSR LIDVILHSSV GDLSPELVDQ IRNRQRNFDT 600
  601 ETRSGAAAKL KQNQHTTAIL GLRIPRRVKD NKPLILEAMH ANGFIGAKMI RAKLFHKFLW 660
  661 VYVSGLPNWC DPFDNDKEGH HDKNLSQSSV LFSMVGATKK MPLELFLQVV GSAKKIDHMI 720
  721 TKCRLGKTLS EIPTEEYNQL MDTHAKGRLS RLVNILDKLK LVQLAKELVD DSGAPSDALP 780
  781 THSIELRPYI EEPTPRILPS SHVNVNHRPK IRHDFVLSRQ EFVDAYWETL EYCYLTAGLA 840
  841 EPSSAFPGCS VPEVSHPRSW SSLRVMTTEQ RLELQQRIMN ASENGKLPFR DCRIIARELN 900
  901 LSVQQVLCVS SSQNRQLHGQ PTVPAARKRR KVNSGSTSKK RKRSADEITL KFIKRNVETI 960
  961 ESTEPRPAQS IPHEEVSERI SPSTFHTDSL PQVDEDTISS PRISRSTILR GSCMREKRFV1020
 1021 WTYDSDRKLL MIYTRSRATL GAVSHRVDWN SLSDLPAPPA ACRRRIAYLR KKTNIRPAVS1080
 1081 RVCDLLGIRY ARYLEKEKRW KLRGLPSEIS NSSHDNCVDP DSEQFFWDNF EDPEIKSALD1140
 1141 EVLEFIRVEK MEQTKRVGSK NERNNDDNDA TKEVPNGQKQ PVLGARATCA STAIQESGLR1200
 1201 EHAKSYRLSN AIHASKNMDI PFRSHEKAIN HNKDDIAKRD VCRSLAVANA LELLKLAFLS1260
 1261 TSSGPEVQAS LAATLQLYSE TEIFTAFSFL REKNFMVTGD GTKPYTLSGK FFFNASNSPF1320
 1321 PFGSGKKASE FSQWVGQQKN TMDDGVCLYP DLQCGEIVQL FSLVLSGESF ISPSLPSEGV1380
 1381 GEADEPNSSS LFVDDNSELD ESSHKRKADM VKLKSSKTKK HKPLPKIESD FCYRREKGFP1440
 1441 GLQVALNQER IKTSNLTQEL HDKECLIFTS AWEMGSKDVD SQVESHNMSS LYLNNSSSCR1500
 1501 RLLSESHLEN SYSGWPWDAI KTYAEQSPSL CCNKNEPDIL SSDLFRNAFC VVHKAGEQGV1560
 1561 NLREMSQALD PLGIQFVDLI VHTLKRFQLV IKVNAYDGVQ IVDSIHKSKY HITTLADSSH1620
 1621 CSCLRASAFE MAETGDTENL LREKHAMSSD VQGSVKMLGD GHTVTVLNVQ SKSSSPQIRY1680
 1681 QSPVGQKRSF TPAQDNRGSD CCHACERHIY HPILPWINGD GSMNNTVYEG LSRRIIGYTM1740
 1741 QYPGVVEEDI IHRMDVLNPQ TCRTLLEKLM FDKHLYARVF DERAPSAPTL LQSILKQDRC1800
 1801 KEPSKCNKRY FANPMSTFLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..221] MSA 1.046971 View MSA. No confident structure predictions are available.
    2 View Details [222..375] deduced N/A No confident structure predictions are available.
    3 View Details [376..611] deduced N/A No confident structure predictions are available.
    4 View Details [612..878] MSA 1.031968 View MSA. No confident structure predictions are available.
    5 View Details [879..1103] deduced N/A No confident structure predictions are available.
    6 View Details [1104..1211] deduced N/A No confident structure predictions are available.
    7 View Details [1212..1389] MSA 1.024972 View MSA. No confident structure predictions are available.
    8 View Details [1390..1587] deduced N/A No confident structure predictions are available.
    9 View Details [1588..1820] MSA 2.018962 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle