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Protein Overview: ISPG_ORYSJ

General Information:
Name(s) found: ISPG_ORYSJ [Swiss-Prot]
Description(s) found:
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  • gi|51964146|ref|XP_506856.1| PREDICTED OJ1669_F01.30 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50910233|ref|XP_466605.1| putative GCPE protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|47497312|dbj|BAD19354.1| putative GCPE protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|222623195|gb|EEE57327.1| hypothetical protein OsJ_07430 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215767934|dbj|BAH00163.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115447171|ref|NP_001047365.1| Os02g0603800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113536896|dbj|BAF09279.1| Os02g0603800 [Oryza sativa Japonica Group] [NCBI NR]
  • 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (ferredoxin), chloroplastic OS=Oryza sativa subsp. japonica GN=ISPG PE=2 SV=1 [Swiss-Prot]
  • putative GCPE protein [Oryza sativa (japonica cultivar-group)]gi|51964146|ref|XP_506856.1| PREDICTED OJ1669_F01.30 gene product [Oryza sativa (japonica cultivar-group)]gi|47497312|dbj|BAD19354.1| putative GCPE protein [Oryza sativa (japonica cultivar-gr [nrdb_11152004_Chlamydomonas]
  • Os02g0603800 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative GCPE protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 744 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATGVAPAPL PHVRVRDGGI GFTRSVDFAK ILSVPATLRV GSSRGRVLVA KSSSTGSDTM  60
   61 ELEPSSEGSP LLVPRQKYCE SIYETRRRKT RTVMVGNVPL GSDHPIRIQT MTTSDTKDVA 120
  121 KTVEEVMRIA DKGADFVRIT VQGRKEADAC FEIKNTLVQK NYNIPLVADI HFAPTVALRV 180
  181 AECFDKIRVN PGNFADRRAQ FEQLEYTEDD YQKELEHIEK VFSPLVEKCK QYGRAMRIGT 240
  241 NHGSLSDRIM SYYGDSPRGM VESALEFARI CRKLDFHNFV FSMKASNPVI MVQAYRLLVA 300
  301 EMYNLGWDYP LHLGVTEAGE GEDGRMKSAI GIGTLLMDGL GDTIRVSLTE PPEEEIDPCR 360
  361 RLANLGTHAA DLQIGVAPFE EKHRRYFDFQ RRSGQLPLQK EGEEVDYRGV LHRDGSVLMS 420
  421 VSLDQLKAPE LLYRSLAAKL VVGMPFKDLA TVDSILLREL PPVEDAQARL ALKRLVDISM 480
  481 GVLTPLSEQL TKPLPHAIAL VNVDELSSGA HKLLPEGTRL AVTLRGDESY EQLDLLKGVD 540
  541 DITMLLHSVP YGEEKTGRVH AARRLFEYLE TNGLNFPVIH HIEFPKSVNR DDLVIGAGAN 600
  601 VGALLVDGLG DGVLLEAADQ EFEFLRDTSF NLLQGCRMRN TKTEYVSCPS CGRTLFDLQE 660
  661 VSAQIREKTS HLPGVSIAIM GCIVNGPGEM ADADFGYVGG APGKIDLYVG KTVVQRGIAM 720
  721 EGATDALIQL IKDHGRWVDP PVEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..151] MSA 1.070984 View MSA. No confident structure predictions are available.
    2 View Details [152..350] deduced N/A No confident structure predictions are available.
    3 View Details [351..744] PSI-BLAST 33.522879 SULFITE REDUCTASE STRUCTURE AT 1.6 ANGSTROM RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.869619296732501 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.0799712629603699 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle