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Protein Overview: gi|115446411, gi...

General Information:
Name(s) found: gi|50909061 [NCBI NR]
gi|49388930 [NCBI NR]
gi|49388258 [NCBI NR]
gi|115446411 [NCBI NR]
gi|113536516 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|50909061|ref|XP_466019.1| RNA binding protein Rp120 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|49388930|dbj|BAD26152.1| RNA binding protein Rp120 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|49388258|dbj|BAD25376.1| RNA binding protein Rp120 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115446411|ref|NP_001046985.1| Os02g0523500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113536516|dbj|BAF08899.1| Os02g0523500 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 986 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASATGASGW LRGKVKGVTS GDCLLIMGST KADVPPPEKS ITLSYLMAPR LARRGGVDEP  60
   61 FAWESREFLR KLCIGKEVTF RVDYTAPNVG REFGTVYLGD KNVAYSIIAA GWARVKEQGP 120
  121 KGGEPSPYLT ELLRLEEVAK QQGLGRWSKE PGAAEESIRD LPPSAIGEAS GFDAKGFAVA 180
  181 NKGKSLEAIV EQVRDGSTVR VYLLPSFQFV QIYVAGVQSP SMGRRPPNPT VVAAAESTAD 240
  241 GATNGGDSEE APAPLTTAQR LAAAAVSTEI PPDRFGIEAK HFTETRVLNR DVRIVVEGTD 300
  301 SFSNIIGSVY YSDGDTLKDL ALELVENGLA KYVEWSANMM DVDAKIKLKN AELQAKKDQL 360
  361 RIWTGFKPPV TNSKPIHDQK FTGKVVEVVS GDCIIVADDA APYGSPSAER RVNLSSIRAP 420
  421 KMGNPRRDEK PDNFAREAKE FLRTRLIGKQ VTVEMEYSRR ISTVDGQPTT NTADARVLDY 480
  481 GSVFLGSPSQ ADGDDVSSIP SSGNQPGINI AETLLSRGFA RTSKHRDYEE RSHYFDLLLA 540
  541 AESRAEKAKK GVHSAKESPV MHITDLTTVS AKKARDFLPF LQRNRRHSAI VEYVFSGHRF 600
  601 KLTIPKETCS IAFSFSGVRC PGKDEPYSNE AIALMRRRIL QRDVEIEVEA VDRTGTFLGS 660
  661 LWESKTNMAS VLLEAGLAKL SSFGLDRIPD ANVLMRAEQS AKQQKLKIWE NYVEGEEVSN 720
  721 GSASESKQKE ILKVVVTEVL GGGKFYVQTV GDHRVASIQQ QLASLKLKDA PVIGAFNPVK 780
  781 GEIVLAQFSA DNSWNRAMIV NGPRGAVSSQ DDKFEVFYID YGNQEVVPYS RIRPADPSIS 840
  841 SSPALAQLCS LAFIKVPNLE DDFGHEAAVY LNDCLLNSQK QYRAMIEERD TSGGKSKGQG 900
  901 TGTILIVTLV DAETETSINA TMLEEGLARL ERSKRWDTRE RKAALQNLEQ FQEKAKKERL 960
  961 QIWQYGDVES DEEEQAPAAR RTGGRR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 29.0 No description for 2f0uA was found.
    2 View Details [154..376] Pfam 7.39794 No description for PF00565.9 was found. No confident structure predictions are available.
    3 View Details [377..986] PSI-BLAST 103.0 No description for 3bdlA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle