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Protein Overview: gi|113535350, gi...

General Information:
Name(s) found: gi|50905115 [NCBI NR]
gi|42409111 [NCBI NR]
gi|42408841 [NCBI NR]
gi|115444079 [NCBI NR]
gi|113535350 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|50905115|ref|XP_464046.1| putative DNA polymerase V [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|42409111|dbj|BAD10361.1| putative DNA polymerase V [Oryza sativa Japonica Group] [NCBI NR]
  • gi|42408841|dbj|BAD10101.1| putative DNA polymerase V [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115444079|ref|NP_001045819.1| Os02g0135700 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113535350|dbj|BAF07733.1| Os02g0135700 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1305 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGKKRPPTA LSEPEAAAAA EEEEAAAKTA PAAEAPAKKK KLAMERKKQR KEIDKERHRQ  60
   61 SAESDAAAAK PKQPAEVAPE AAAAAAAAPV APPPVIPVVS GPGLHMNVFR DLASPEASQR 120
  121 EAAAEALVAE LRQVQVAHEK GGRKEGESEA EGGDGSSRME AEKDDGLENC APSVRYAIRR 180
  181 LIRGISSSRE FARQGFALGL AVVLESIHAI SVEAIMKLIP NLLEYSASMR GPEAKDNLLG 240
  241 RLFGYGSIVR SGRVSGQWAH EEGSPIVKDF VDEVIKLGSK KRYLTEPAVA VILDLAGKLP 300
  301 EEAIISEILE APSVQDWFNR AADAGDPDAL YLALKLQEKT NAQEIFGKLL PYPFSPEGFF 360
  361 AEEHLLSIAA CFKESTFCLP RIHSLWLVIT DMLVREAASQ SDIATSSSKK HKKNKKGSSS 420
  421 EDTKKNLHTF CEVIIEGTLL LSSHDRKHLA FNILLNLLPR LSPSSIQVIL SSKVVHGLMD 480
  481 VLSNESSWLH NAGQHFLKEL VSLVSDDNDR RVAVITNLQK YTGGRFDCMT KTRTVKDLVA 540
  541 KFRSGQDCLC LVQSLMSLFV DESSVTDEPS DQSQTTDENS EVGSMEDKDL FGQGSADLLK 600
  601 SWIVTTIPCV LKNLKLTSKG NSLTDSEMVK CIEEKFLVQT EVLKFLAVQG LFSASLGYEV 660
  661 TSFELHEKFK WPKPAISTSI RNECIEQLQF LIEDAQKDEA LHVSEVKSND LGFYFMRFIN 720
  721 TLCNIPSVSL FRTLSSNDDN AFKKLLDVES LLFYEERKVG PGLDSTKMHA MRYLLIQLLL 780
  781 QVLLHPDEYW EAAIDVTICC KKSFPSIVQN DKSSGQPSNE GAEVFNEDGP GKSNKDGPEE 840
  841 HNDDASEDSN EDGPLEFMDV LVQTFLSVLP HVSGPVCFSI EQVFRVVCDE ITETGLLDML 900
  901 RVVKIDLKGS RRQSGSDDDE DDACVDIEDD DETIVEDAEV GDTDSTADGL DEEMDDDSAD 960
  961 EVDEGQDDLK ESVAHESKDG DGAEVTKDGD DSDDSDGMDD DAMFRIDPYI ARIFKERNLP1020
 1021 GSETKQSQLM RFKLRVLTLL EIYLQRNTGN NLVLEVYSFL MQAFVKSHSA DGSEQFKQRI1080
 1081 GGILQKRIFK AKDYPKGDGV EISTLESLLE KALKLASRSR YTTVASVAQN AAFWLLKIIN1140
 1141 SKSHSKQELA SVVEKFQYIL TDYFNNKKSR LKLGFVKEAV RRNPWVGEEL FGFVLQKIGC1200
 1201 TKAEYRRVQT LELVDCILKS WAGDDSSASK VLKKHLSQLC ELIQEVLTKI PENKSRRQEV1260
 1261 RRFCTRVLQT VTKLNLKDRF QKKLNPETLS LCEAQLGAAF VRFQK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..97] deduced N/A No confident structure predictions are available.
    2 View Details [98..353] MSA 1.053968 View MSA. No confident structure predictions are available.
    3 View Details [354..485] deduced N/A No confident structure predictions are available.
    4 View Details [486..561] deduced N/A No confident structure predictions are available.
    5 View Details [562..672] deduced N/A No confident structure predictions are available.
    6 View Details [673..870] deduced N/A No confident structure predictions are available.
    7 View Details [871..1182] PSI-BLAST 5.69897 Heavy meromyosin subfragment
    8 View Details [1183..1305] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle