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Protein Overview: gi|50904869, gi|...

General Information:
Name(s) found: gi|50904869 [NCBI NR]
gi|41052754 [NCBI NR]
gi|255670556 [NCBI NR]
gi|125580616 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • gi|50904869|ref|XP_463923.1| putative caffeine-induced death protein 1 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|41052754|dbj|BAD07610.1| putative caffeine-induced death protein 1 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|255670556|dbj|BAH91508.1| Os02g0122100 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125580616|gb|EAZ21547.1| hypothetical protein OsJ_05175 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 597 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGGEPLRRR RHLADDGFFR FLLPSPKPAT TTTTTPPPAA LFVPPHRLIA PPVPLPQPPR  60
   61 PEERLFIVPP TRPSWLPPLS IPPPATATAP PPTRCPPRRM GNGGGGCFGG RSGVVGWRYG 120
  121 GFVGNGGRRG FERRRVGGGF IGAANAGEAT GGERRAVVRK REKKVWVAVE KKGEDCGGGD 180
  181 EDQAAMGAGY AGGDERDEQV DVDDDEQDDG DGDDPFDVAA DHDLLAVVAD GAGSEKPMEQ 240
  241 LGSPPDQPPP PPPRQRVGTR RWRVERRHDI DAFTPGLLSL YESLNPSEEH KAKQRQLIES 300
  301 LTNSVSKEWP NAQLHLYGSC ANSFGNSHSD VDVCLQIDTA AEENIAELLL ALAETLRKDD 360
  361 FDNVEAITSA RVPIVKIADP GSGLSCDICV NNLFAVANTK LLKDYAQIDE RLLQLAFIVK 420
  421 HWAKLRGVNE TYRGTLSSYA YVLMCISFLQ QREPKILPCL QAMEPTYTVV VDGTECAYFD 480
  481 QVDQLKDFGA ENKESIAELL WAFFHYWAFH HDYRNDVISV RMGNTISKQE KNWTTRVGND 540
  541 RHLICIEDPF ETSHDLGRVV DRQTIRVLRE EFERAATILQ YDDDPCVALF EPYDYES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..85] FFAS03 1.1 Crystal structure of human pregnenolone sulfotransferase (SULT2B1a) in the presence of PAP
    2 View Details [86..251] deduced N/A No confident structure predictions are available.
    3 View Details [252..597] PSI-BLAST 58.522879 Poly(A) polymerase, middle domain; Poly(A) polymerase N-terminal, catalytic domain; Poly(A) polymerase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.222270543382941 bayes_pls_golite062009
  • transferase activity
    		•  0.00393984128503999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle