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Protein Overview: VDAC1_ORYSA

General Information:
Name(s) found: VDAC1_ORYSA [Swiss-Prot]
Description(s) found:
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  • gi|7339529|emb|CAB82853.1| voltage-dependent anion channel [Oryza sativa] [NCBI NR]
  • gi|55976417|sp|Q6K548.3|VDAC1_ORYSJ RecName: Full=Mitochondrial outer membrane protein porin; AltName: Full=Voltage-dependent anion-selective channel protein; Short=VDAC [NCBI NR]
  • Outer mitochondrial membrane protein porin (Voltage-dependent anion-selective channel protein) (VDAC) - Oryza sativa (Rice) [Swiss-Prot]
  • voltage-dependent anion channel [Oryza sativa (japonica cultivar-group)]gi|51963740|ref|XP_506650.1| PREDICTED P0711F01.56-2 gene product [Oryza sativa (japonica cultivar-group)]gi|7339529|emb|CAB82853.1| voltage-dependent anion channel [Oryza sativa]g [nrdb_11152004_Chlamydomonas]
  • voltage-dependent anion channel [Oryza sativa] [nr-271106-contam.fasta]
    • Organism: Oryza sativa
    Length: 274 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVGPGLYPEI GKKARDLLYR DYQTDHKFTL TTYTSNGVAI TATSTKKADL IFGEIQSQIK  60
   61 NKNITVDVKA NSDSNVVTTV TVDELTPGLK SILSFAVPDQ RSGKFELQYS HDYAGVSASI 120
  121 GLTASPVVNL SSVFGTKALA VGADVSLDTA TGNLTKYNAG LSFSNDDLIA SLNLNNKGDS 180
  181 LTASYYHIVN HSATAVGAEL THSFSSNENS LTFGTQHTLD PLTVVKARFN NSGKASALLQ 240
  241 HEWRPKSVWT ISAEVDTKAI DKSSKVGIAV ALKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] MSA 3.096996 View MSA. No confident structure predictions are available.
    2 View Details [102..274] MSA 8.104987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle