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Protein Overview: gi|46806646, gi|...

General Information:
Name(s) found: gi|50898520 [NCBI NR]
gi|46806646 [NCBI NR]
gi|46806460 [NCBI NR]
gi|215715271 [NCBI NR]
gi|115477986 [NCBI NR]
gi|113630821 [NCBI NR]
Description(s) found:
Found 9 descriptions.
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  • gi|50898520|ref|XP_450048.1| CCAAT-box-binding transcription factor-like protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|46806646|dbj|BAD17726.1| CCAAT-box-binding transcription factor-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|46806460|dbj|BAD17596.1| CCAAT-box-binding transcription factor-like protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215715271|dbj|BAG95022.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115477986|ref|NP_001062588.1| Os09g0116400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113630821|dbj|BAF24502.1| Os09g0116400 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 1004 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAKGKPTS TKKGRKAAAS AVAVGDDIDS LKSDVASFAS SLGFLGAAAA SSGFDDSDFR  60
   61 KSGPIIPPKT SKSAQTTDAP PNPKPTTTTT KKPHPLDIHG TNATTKSVSG AVTTNYPLMK 120
  121 ATALSGQWYA DAGELEASVL GARKQVLPSV GLQEMQRISE GKRQLAEKLM AQYTVEYDMV 180
  181 KRGSGDLKLL EISAKSGTSA DKVSAFTCLI EDNPIANMRA LDSLLGMVTS KVGKRYAFTG 240
  241 FDALKELFLK RVLPDRKLKS LIQHPLDILP ETKDGYSLLL FWYWEDCLKQ RYEKFVIALE 300
  301 DALKDMLPNL KDKAMKTVFI LLKEKAEQER RLLTALVNKL GDPERRAASS AAYLLTSLLS 360
  361 AHPNMKMVVI DEVDSFLFRP HVGLRAKYQA VNFLSQIFLT SKGDGPKIAK RLVDVYIALF 420
  421 KVLMSCSRAT EGVKHSKYGK KTNENGKKEK GNDFNSHVKH EDPCAGSDLE MDSRILSALL 480
  481 TGVNRALPYV ASSEVDDIVE VQTPILFRLV HSVNFNVGVQ ALMLLYQIST KNQIASDRFY 540
  541 RALYAKLLSP ASVTSSKPEL FLGLLVKAMK NDVMLKRVAA FAKRLLQVAL QRPPQYACGC 600
  601 LFILSEVLKA KPPLWAIVLQ NESVDDGIEH FEDIVENTDC PAITSRTTDK CNDILATLEK 660
  661 CNSDAEDACD TIECVSPISS GEKDGKGTSA EGLTLQASYN PRHREPSYCN ADHASWWELT 720
  721 ALALHVHPSV STMARTLLSG NNIVYSGDPL TDLSLPAFLD KFMEKKPKGN RIAEGKWHGG 780
  781 SQIAPAKKLD QSHHLIGEEL LELVEKEVPP EDVVFHRFYM NKTGPIKPKA KKKTAVLDED 840
  841 TGELFADDVD DASDESDDEM QELGIGSIED GEYDYDNLDA TTFEEEGDLL RYDSDVELHD 900
  901 ISDDISSGAD SDTEALEGAN HSDGNDSDGE EPVQGQKRKH GAKSGASPFA KLEDYEHLMD 960
  961 GEAEKPTFKK GRKHRVTRDS KEKRKGLSSK EKSGSRKKRS KRSE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..182] deduced N/A No confident structure predictions are available.
    2 View Details [183..273] deduced N/A No confident structure predictions are available.
    3 View Details [274..459] deduced N/A No confident structure predictions are available.
    4 View Details [460..704] MSA 1.135968 View MSA. No confident structure predictions are available.
    5 View Details [705..796] deduced N/A No confident structure predictions are available.
    6 View Details [797..1004] MSA 2.067991 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle