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Protein Overview: HOX9_ORYSJ

General Information:
Name(s) found: HOX9_ORYSJ [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Homeobox-leucine zipper protein HOX9 OS=Oryza sativa subsp. japonica GN=HOX9 PE=2 SV=1 [Swiss-Prot]
    • Organism: Oryza sativa Japonica Group
    Length: 840 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAAVAMRSG SGSDGGGGGY DKAGMDSGKY VRYTPEQVEA LERVYAECPK PSSSRRQQLL  60
   61 RDCPILANIE PKQIKVWFQN RRCRDKQRKE ASRLQAVNRK LTAMNKLLME ENERLQKQVS 120
  121 QLVHENAYMK QQLQNPSLGN DTSCESNVTT PQNPLRDASN PSGLLTIAEE TLTEFLSKAT 180
  181 GTAVDWVPMP GMKPGPDSFG IVAVSHGCRG VAARACGLVN LEPTKIVEIL KDRPSWFRDC 240
  241 RSLEVFTMFP AGNGGTIELV YMQMYAPTTL VPARDFWTLR YTTTMEDGSL VVCERSLSGS 300
  301 GGGPSTASAQ QFVRAEMLPS GYLVRPCEGG GSIVHIVDHL DLEAWSVPEV LRPLYESSRV 360
  361 VAQKMTTAAL RHIRQIAQET SGEVVYALGR QPAVLRTFSQ RLSRGFNDAI SGFNDDGWSV 420
  421 MGGDGIEDVI IACNAKKVRN TSTSANAFVT PGGVICAKAS MLLQSVPPAV LVRFLREHRS 480
  481 EWADYNFDAY SASSLKTSSC SLPGLRPMRF SGSQIIMPLA HTVENEEILE VVRLEGQALT 540
  541 HDDGLMSRDI HLLQLCTGID EKSMGSCFQL VSAPIDELFP DDAPLISSGF RVIPLDMKTD 600
  601 GTPAGRTLDL ASSLEVGSTA QPTGDASMDD CNLRSVLTIA FQFPYEMHLQ DSVATMARQY 660
  661 VRSIVSSVQR VSMAISPSRS GLNAGQKIIS GFPEAPTLAR WICQSYQFHL GVELLRQADD 720
  721 AGEALLKMLW DYEDAILCCS FKEKPVFTFA NEMGLNMLET SLVALQDLSL DKIFDEAGRK 780
  781 ALYNEIPKLM EQGYVYLPGG VCLSGMGRHV SFEQAVAWKV LGEDNNVHCL AFCFVNWSFV 840
  841

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] PSI-BLAST 14.0 Solution structure of the homeobox domain of the human paired box protein Pax-6
    2 View Details [161..390] PSI-BLAST 25.522879 No description for 2psoA was found.
    3 View Details [391..556] MSA 1.06898 View MSA. No confident structure predictions are available.
    4 View Details [557..682] deduced N/A No confident structure predictions are available.
    5 View Details [683..840] MSA 26.046968 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle