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Protein Overview: gi|37533920, gi|...

General Information:
Name(s) found: gi|37533920 [NCBI NR]
gi|31431830 [NCBI NR]
gi|215695184 [NCBI NR]
gi|14018055 [NCBI NR]
gi|115481820 [NCBI NR]
gi|113639112 [NCBI NR]
Description(s) found:
Found 10 descriptions.
SHOW ALL
  • gi|37533920|ref|NP_921262.1| putative RNA-binding protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|31431830|gb|AAP53549.1| Pumilio-family RNA binding repeat containing protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215695184|dbj|BAG90375.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|14018055|gb|AAK52118.1|AC079936_14 Conserved unknown protein with similarity to putitive RNA-binding proteins [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115481820|ref|NP_001064503.1| Os10g0390100 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113639112|dbj|BAF26417.1| Os10g0390100 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 839 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVCFGSKALR RKGDKQRCLP EGDIDDSLPM RRGRKDKSEK PRKGGSSSSN RPSAEKAKHG  60
   61 RKKSGDGKKS KGRGKSCHSD SSIEMNPGHM KNDNTLLPSK ASKPVTNFLR KRVDPETAKY 120
  121 FLEISYLFDN KEIDLEERAT ICANALEETK GKELELATDG PISHTLQVLV EGCELEQLCV 180
  181 FLHNSIESFH IIAVDKFGSH VAEAALKSLA THLEDEASRG IIEDILIRIC KVIAGDAANV 240
  241 MSSCYGSHVL RTLLCLCKGV PLQSLQDFHT TKRSAVLAER LSCGSTRSGG SDPKNQGCGF 300
  301 SDIFKSFVRE MLQNAKDDIA SLETDKNSSL VLQTALKLSA GDDHELNYII SILLGFDEDD 360
  361 TAQKKDRSEQ KNEIIALLED TAYSHLLEVI VEVAPEELRN NMLTGTLKGA LFAISSHHCG 420
  421 NYVVQALVAS AKTSDQMEQI WDELGSRINE LLELGKAGVV ASILAACQRL ETKRLESSQV 480
  481 LSAALSSNSE SSDSIVAHML FLENYLHQKS SWEWPLGAKM SVLGCLMLQS ILQYPHQYIR 540
  541 PYVASLLAMD DNKILQISKD SGGSRVLEAF LCSSATAKRK FKVFAKLQGH YGEIAMNPSG 600
  601 SFLVEKCFTA SNFSHKEAIV VELLAVQTEL SRTRHGFHLL KKLDVDRYSR RPDQWRASQT 660
  661 SKETTQREFQ VEFGLSSKGA GQNIEELLTS RSPSKKRKQK DKTDVTTEDA STNKQDLSHV 720
  721 GKTKRIKSEK TTCEKESSNK KPTNEDSGTS MAFLKNSAKR KSPGFLSDKP SFKRQKHHKP 780
  781 NAGNSSGKMF VRDSAGTPFV RNSGKQKRSI AELADLAGKE KLSASEVRKL LKTEMPGKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..81] deduced N/A No confident structure predictions are available.
    2 View Details [82..485] PSI-BLAST 82.39794 Pumilio 1
    3 View Details [486..681] MSA 2.108969 View MSA. No confident structure predictions are available.
    4 View Details [682..839] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle