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Protein Overview: PROFA_ORYSJ

General Information:
Name(s) found: PROFA_ORYSJ [Swiss-Prot]
Description(s) found:
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  • gi|37532736|ref|NP_920670.1| Profilin A [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|37532730|ref|NP_920667.1| Profilin A [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|31431135|gb|AAP52957.1| Profilin A, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|31431132|gb|AAP52954.1| Profilin A, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215712311|dbj|BAG94438.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|15217236|gb|AAK92580.1|AC074354_14 Profilin A [Oryza sativa Japonica Group] [NCBI NR]
  • gi|15217233|gb|AAK92577.1|AC074354_11 Profilin A [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125574366|gb|EAZ15650.1| hypothetical protein OsJ_31062 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125574364|gb|EAZ15648.1| hypothetical protein OsJ_31061 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115481512|ref|NP_001064349.1| Os10g0323900 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115481510|ref|NP_001064348.1| Os10g0323600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113638958|dbj|BAF26263.1| Os10g0323900 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|113638957|dbj|BAF26262.1| Os10g0323600 [Oryza sativa Japonica Group] [NCBI NR]
  • Profilin-A OS=Oryza sativa subsp. japonica GN=Os10g0323600 PE=2 SV=1 [Swiss-Prot]
  • Profilin A [Oryza sativa (japonica cultivar-group)]gi|37532730|ref|NP_920667.1| Profilin A [Oryza sativa (japonica cultivar-group)]gi|31431135|gb|AAP52957.1| Profilin A [Oryza sativa (japonica cultivar-group)]gi|31431132|gb|AAP52954.1| Profilin A [Oryz [nrdb_11152004_Chlamydomonas]
  • Os10g0323900 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Profilin-A [nr-271106-contam.fasta]
  • Profilin A [Oryza sativa] [nr-271106-contam.fasta]
  • Os10g0323600 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Profilin A, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 131 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSWQTYVDEH LMCEIEGHHL TSAAIVGHDG TVWAQSAAFP QFKPEEMTNI MKDFDEPGFL  60
   61 APTGLFLGPT KYMVIQGEPG AVIRGKKGSG GITVKKTGQA LVVGIYDEPM TPGQCNMVVE 120
  121 RLGDYLVEQG L

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..131] PSI-BLAST 55.69897 Profilin (actin-binding protein)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • actin binding
    		•  7.981958446142 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  6.51470611165788 bayes_pls_golite062009
  • actin monomer binding
    		•  3.80837480536839 bayes_pls_golite062009
  • binding
    		•  3.26636517628678 bayes_pls_golite062009
  • phosphatidylinositol-4,5-bisphosphate binding
    		•  3.24248939295046 bayes_pls_golite062009
  • protein binding
    		•  2.14534188091242 bayes_pls_golite062009
  • phosphoinositide binding
    		•  1.69872978885701 bayes_pls_golite062009
  • phospholipid binding
    		•  1.52027694872856 bayes_pls_golite062009
  • transporter activity
    		•  1.434681455285 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.23300160340736 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.490905558612378 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle