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Protein Overview: gi|37532658, gi|...

General Information:
Name(s) found: gi|37532658 [NCBI NR]
gi|31431087 [NCBI NR]
gi|22725930 [NCBI NR]
gi|19881543 [NCBI NR]
Description(s) found:
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  • gi|37532658|ref|NP_920631.1| hypothetical protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|31431087|gb|AAP52918.1| hypothetical protein LOC_Os10g17300 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|22725930|gb|AAN04940.1| Unknown protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|19881543|gb|AAM00944.1|AC021892_8 Hypothetical protein [Oryza sativa] [NCBI NR]
  • hypothetical protein [Oryza sativa (japonica cultivar-group)]gi|31431087|gb|AAP52918.1| hypothetical protein [Oryza sativa (japonica cultivar-group)]gi|22725930|gb|AAN04940.1| Unknown protein [Oryza sativa (japonica cultivar-group)]gi|19881543|gb|AAM00 [nrdb_11152004_Chlamydomonas]
  • hypothetical protein LOC_Os10g17300 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Hypothetical protein [Oryza sativa] [nr-271106-contam.fasta]
  • Unknown protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 823 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSSASPSVA PSAEYAEHLS NLVATPSLSH EHHYFLGSIG NLDPTEFIIA ETNRIPFRLA  60
   61 NPNLGHWKNT FKSWPSLDKT SPEKSWAMWY KRVSASKQVH WDELGIGQAL ALTLANSAKD 120
  121 EPLMASAAYF WSNTLKAFLF NQGPMTPTLL DITMITGLDV TSSANPMSLN TKNQFDFRTK 180
  181 SIGGWSGYVA AYMGKGSVTP REHTAFLLMW LEKFLFCGSS CGLTTNWQFL AEALETKRQF 240
  241 PLGKILLDYL YQMLSNASAK IVTGSVLSAG CESATFDRRR IPKAGADHSF YEGFQRDARV 300
  301 WFPYEDSVNF DLPADFKFED INSEKFQKSR EVFSAAISPC ILPVGIHQGR NIQVSYEFYH 360
  361 PMSSARKSGM GQLPIGLFFT DKIQCSGEIS STLMMDLLLN IPGPPLASIE NIELARFRSK 420
  421 NFDRWWGEWK QHIFHQSASI YMTDLFPDVV PQTTKSSPPR TSNRGKDIEY APGLLPNGGR 480
  481 KRKTKASAID PSALAPKKKT KKNKPKPADD LPTLDPSIEQ ALDEEEIGED FDQAAAELSD 540
  541 AGEKTPSASP KQTPPNPAAP AHFSRKKKTA VKKKSATTTL KPAPPQMSSD RTPSATASHN 600
  601 IEEEEQPTAP AIPVLADLFS FDIKDYFDEE AEEETTSKAL APLDETFKKT LEDISLRLES 660
  661 SLDNLVADYG SIRARFAKIQ ALIPDDLANT ITPAVYLEQH QFKLEKAKQR IADRRERKDI 720
  721 KATIQANRQL SNIDWLEARK IDLIAQLEEC NAELDLEKQK LANLPNAVEE QKSRLKSAIK 780
  781 NVADMTKSFK AIFATDAQDI QAIEEVDQIR QRAVSAIQRY LSA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] MSA 1.103989 View MSA. No confident structure predictions are available.
    2 View Details [78..278] Pfam 10.259637 No description for PF10536.1 was found. No confident structure predictions are available.
    3 View Details [279..823] PSI-BLAST 6.69897 No description for 2dfsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.84

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle