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Protein Overview: gi|37531504, gi|...

General Information:
Name(s) found: gi|37531504 [NCBI NR]
gi|31430424 [NCBI NR]
gi|255679241 [NCBI NR]
gi|21671885 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|37531504|ref|NP_920054.1| putative transposable element [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|31430424|gb|AAP52341.1| hAT family dimerisation domain containing protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|255679241|dbj|BAF26148.2| Os10g0170600 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|21671885|gb|AAM74247.1|AC074355_9 Putative transposable element [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 772 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPSPPLSS DDDARSGSSN SGAKACCRPP QPPIKRTTTR SKSRLAIAGA PSASTKAGAP  60
   61 SAPRTPEASS SANGLRLFKS MGFTTNSTAG TGCGSSSQQE SQSLPPQAES VNDSEPIQVE 120
  121 DDEPEDDSEN FGTKRKLTSV VWKDFKKVKV CGDVKAECLH CHKRLGGKSS NGTSHLHDHL 180
  181 KICTLRKIKM GPKTLAQSSL RFNSIEGGKV SVDTYTFDPA VARRELAAMI ILHEYPLSIV 240
  241 DHIGFRRFVS ALQPLFKMVT RNTIRKDIMD TYEEEKKRAL AYMAGAKSRV GITTDLWTSD 300
  301 NQKRGYMAIT AHFIDDSWTL RSIIMRFIYV PAPHTAEVIC EHLYEALVEW NLDEKISTLT 360
  361 LDNCTTNDKV ISELIKKIGK RKLMLEGKLL HMRCAAHILN LIVRDGLDVI KDSIAKVRES 420
  421 VAFWTATPKR VEKFEEIAKH VKVKMENKLG LDCKTRWNST YRMLSIALPC ARAFDRAIRV 480
  481 EKLFDCAPSE EEWAFASEVV DRLKLFNDIT AVFSGTNYVT SNIQLLKICE AKEQIRKWAV 540
  541 CGDSTIEEMS VEMIQKFDKY WKDIQGPMGL ATILDPRFKI DYLLGFIETI TGQSSEECAT 600
  601 KVAEVKDTLY DLMKEYEVED DEDNTESSAP PLVNSDLLSS ITARVTSRRP AAIRVKSELD 660
  661 RYLEDELVSI NTENFKILDW WKVAGTSFPT LRKVARDIFA IPVSTVASES AFSTSGRVLS 720
  721 EHRSRLTPEL LEALMCSQDW LRNKYRADNE EAASFWSCLQ DIQDRIEGLA LV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..122] MSA 1.143993 View MSA. No confident structure predictions are available.
    2 View Details [123..207] FFAS03 3.14 No description for 2djrA was found.
    3 View Details [208..772] PSI-BLAST 50.69897 Three-dimensional structure of the Hermes DNA transposase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • catalytic activity
    		•  0.722279828632226 bayes_pls_golite062009
  • hydrolase activity
    		•  0.29272620969648 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.24934115119652 bayes_pls_golite062009
  • nuclease activity
    		•  0.239989310123501 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle