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Protein Overview: LBD6_ORYSJ

General Information:
Name(s) found: LBD6_ORYSJ [Swiss-Prot]
Description(s) found:
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  • gi|75271949|sp|Q8LQH4.1|LBD6_ORYSJ RecName: Full=LOB domain-containing protein 6; AltName: Full=Protein ASYMMETRIC LEAVES 2; AltName: Full=Crown rootless-like protein 3 [NCBI NR]
  • gi|57999833|dbj|BAD88526.1| LOB domain protein [Oryza sativa Japonica Group] [NCBI NR]
  • gi|34907508|ref|NP_915101.1| B1099D03.24 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215767472|dbj|BAG99700.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215701056|dbj|BAG92480.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|20804970|dbj|BAB92647.1| putative LOB DOMAIN 6 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115441533|ref|NP_001045046.1| Os01g0889400 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113534577|dbj|BAF06960.1| Os01g0889400 [Oryza sativa Japonica Group] [NCBI NR]
  • LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=LBD6 PE=2 SV=1 [Swiss-Prot]
  • B1099D03.24 [Oryza sativa (japonica cultivar-group)]gi|20804970|dbj|BAB92647.1| B1099D03.24 [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os01g0889400 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative LOB DOMAIN 6 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • LOB domain protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 269 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSASSVP APSGSVITIA SASASAAANT AACGTGSPCA ACKFLRRKCQ PDCVFAPYFP  60
   61 PDNPQKFVHV HRVFGASNVT KLLNELHPYQ REDAVNSLAY EADMRLRDPV YGCVAIISIL 120
  121 QRNLRQLQQD LARAKFELSK YQQAAAAAAA ASASTGTNNG PHSMAEFIGN AVPNGAQSFI 180
  181 NVGHSAALAS VGGAAACFGQ EQQFSAVHML SRSYEGEPIA RLGGNGGYEF GYSTSMAGGG 240
  241 HMSGLGALGG APFLKSGIAG SDERQGAGQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] Pfam 62.387216 No description for PF03195.5 was found. No confident structure predictions are available.
    2 View Details [159..269] MSA 1.043957 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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