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Protein Overview: gi|113547572, gi...

General Information:
Name(s) found: gi|50919879 [NCBI NR]
gi|29367351 [NCBI NR]
gi|215737622 [NCBI NR]
gi|215686344 [NCBI NR]
gi|19071625 [NCBI NR]
gi|125585073 [NCBI NR]
gi|115451001 [NCBI NR]
gi|113547572 [NCBI NR]
gi|108706400 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|50919879|ref|XP_470300.1| putative zinc finger DNA-binding protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|29367351|gb|AAO72548.1| putative H-protein promoter binding factor-2a [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215737622|dbj|BAG96752.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215686344|dbj|BAG87605.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|19071625|gb|AAL84292.1|AC073556_9 putative zinc finger DNA-binding protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|125585073|gb|EAZ25737.1| hypothetical protein OsJ_09572 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115451001|ref|NP_001049101.1| Os03g0169600 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113547572|dbj|BAF11015.1| Os03g0169600 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108706400|gb|ABF94195.1| Dof domain, zinc finger family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 440 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGECKVGGGG GGGDCLIKLF GKTIPVPEPG ACAAGDVDKD LQHSGSSTTE PKTQENTVQD  60
   61 STSPPPQPEV VDTEDSSADK NSSENQQQQG DTANQKEKLK KPDKILPCPR CSSMDTKFCY 120
  121 YNNYNINQPR HFCKNCQRYW TAGGAMRNVP VGAGRRKSKS VSAASHFLQR VRAALPGDPP 180
  181 LYAPVKTNGT VLSFGSDLST LDLTEQMKHL KDKFIPTTGI KNTDEMPVGL CAEGLSKTEE 240
  241 SNQTNLKEKV SADRSPNVAQ HPCMNGGAMW PFGVAPPPAY YTSSIAIPFY PAAAAAVAAY 300
  301 WGCMVPGAWN APWPPQSQSQ SVSSSSAASP VSTMTNCFRL GKHPRDGDEE LDSKGNGKVW 360
  361 VPKTVRIDDV DEVARSSIWS LIGIKGDKVG ADHGRGCKLA KVFESKDEAK ASTHTAISSL 420
  421 PFMQGNPAAL TRSVTFQEGS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] FFAS03 1.22 Eea1; Eea1 homodimerisation domain
    2 View Details [165..440] MSA 6.138997 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.51

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle