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Protein Overview: gi|28273361, gi|...

General Information:
Name(s) found: gi|50917987 [NCBI NR]
gi|28273361 [NCBI NR]
gi|222625619 [NCBI NR]
gi|215766470 [NCBI NR]
gi|115454761 [NCBI NR]
gi|113549452 [NCBI NR]
gi|108710575 [NCBI NR]
Description(s) found:
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  • gi|50917987|ref|XP_469390.1| putative zinc binding protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|28273361|gb|AAO38447.1| putative zinc binding protein [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|222625619|gb|EEE59751.1| hypothetical protein OsJ_12219 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215766470|dbj|BAG98778.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115454761|ref|NP_001050981.1| Os03g0698500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113549452|dbj|BAF12895.1| Os03g0698500 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108710575|gb|ABF98370.1| Yippee, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • putative zinc binding protein [Oryza sativa (japonica cultivar-group)]gi|28273361|gb|AAO38447.1| putative zinc binding protein [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os03g0698500 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative zinc binding protein [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • Yippee, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 129 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLFVMHLE GKVYSCKHCH THLGLSSDII SKSFHCKHGK AYLFNKVVNV TSGVKEDRMM  60
   61 ITGMHTVSDI FCVGCGSIVG WKYEAAHEKS QRYKEGKFIL ERYKVSGPDG SHYFVTHDAH 120
  121 VGGSDVDDV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..129] FFAS03 1.04 Solution Structure of the N-terminal Zinc Fingers of the Xenopus laevis double stranded RNA binding protein ZFa

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.71755880039503 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.0828253815733649 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle