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Protein Overview: gi|115470411, gi...

General Information:
Name(s) found: gi|51963248 [NCBI NR]
gi|50933847 [NCBI NR]
gi|28201304 [NCBI NR]
gi|215704847 [NCBI NR]
gi|115470411 [NCBI NR]
gi|113610340 [NCBI NR]
Description(s) found:
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  • gi|51963248|ref|XP_506148.1| PREDICTED P0474G09.102 gene product [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|50933847|ref|XP_476451.1| putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|28201304|dbj|BAC56812.1| putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215704847|dbj|BAG94875.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115470411|ref|NP_001058804.1| Os07g0124500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113610340|dbj|BAF20718.1| Os07g0124500 [Oryza sativa Japonica Group] [NCBI NR]
  • putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa (japonica cultivar-group)]gi|51963248|ref|XP_506148.1| PREDICTED P0474G09.102 gene product [Oryza sativa (japonica cultivar-group)]gi|28201304|dbj|BAC56812.1| putative Eukaryoti [nrdb_11152004_Chlamydomonas]
  • Os07g0124500 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative Eukaryotic translation initiation factor 3 subunit 8 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 936 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASRFWGQGD SDSEEEEQEI ESEAGSESED EGGDAGGRSN QNRYLRTTNA SDSDESDSGQ  60
   61 RVVRSLKDKR NEELKITVDQ MRNAMKINDW VNLQESFEKL NKQLEKVVRV NESTTVPNMY 120
  121 VKALVLLEDF LAEALANKEA KKKMSSSNAK ALNAMKQKLK KNNKQYENLI QECREHPERF 180
  181 EDDDVEDKDD DDETDDDASD ADIEDPEKMV MSESEEEGDD DEEGDQDGGA WEKKISKKDK 240
  241 LMDKQFLKDP SEITWDIVDK KLKEIVASRG KKGTGRIERV EQLTFLTRVA KTPAQKLEIL 300
  301 FHVISAQFDV NPSLLGHMPV NMWKKCVNNM LLVLDILQQY PNIVVDTSVE PDEKETQKGA 360
  361 DYDGQIHVTG DLVAFLERLD SEFFKSLQCT DPYTKDYVQR LRDEPLFLVV AQNVQDYLER 420
  421 VGNFKAEAKV ALRRVELVYY KPQEVYDAMR KLAEQDEDSR EDDDADADEE RQVVDDNRGP 480
  481 PPFVVIPEVV PRKPTFPESG RALMDALMSV IYKYGDERTK ARAMLCDIYH HAISDKFSVA 540
  541 RDLLLMSHLQ DGVQLMDISS QILFNRVMAQ LGLCAFRAGL IIEAHGCLSE LYSTGRVKEL 600
  601 LAQGVQQSRY HEKTPEQERL ERRRQMPYHM HINLELLEAT HLICAMLIEV PNMAASTYDR 660
  661 RKSMNRTFRR LLEISERQTF VGPPENVRDH VMAATRALRK GDYQKAFDVI NSLEIWKLLR 720
  721 NKEHVLEMLK LKIKEEALRT YLLSYSSCYE SLSLDQLTTM FDLSEQQAHS IVSKMMMHEE 780
  781 LHASWDQPTK CIIFHNVDQT RLQGLLFQMS DKLSVLVESN ERAYEAKTGG TLEGAPPRRR 840
  841 GGDGQDSSNL GKWQENFVSS QGRQGGGRSG YSGRVGGPGR GGGGYQRDRG SQGSRGGYGG 900
  901 GSRFQDGGRS RNQSGSMARG GDGGARMVSL NRSGRG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..212] MSA 2.045972 View MSA. No confident structure predictions are available.
    2 View Details [213..274] deduced N/A No confident structure predictions are available.
    3 View Details [275..426] MSA 1.050964 View MSA. No confident structure predictions are available.
    4 View Details [427..676] deduced N/A No confident structure predictions are available.
    5 View Details [677..785] Pfam 19.318759 No description for PF01399.19 was found. No confident structure predictions are available.
    6 View Details [786..936] PSI-BLAST 32.69897 No description for 1y0fB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle