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Protein Overview: ALFL4_ORYSJ

General Information:
Name(s) found: ALFL4_ORYSJ [Swiss-Prot]
Description(s) found:
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  • gi|50924564|ref|XP_472642.1| OSJNBa0027P08.7 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38344539|emb|CAD40971.2| OSJNBa0027P08.7 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|215686557|dbj|BAG88810.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|125590514|gb|EAZ30864.1| hypothetical protein OsJ_14937 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115458594|ref|NP_001052897.1| Os04g0444900 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113564468|dbj|BAF14811.1| Os04g0444900 [Oryza sativa Japonica Group] [NCBI NR]
  • PHD finger protein ALFIN-LIKE 4 OS=Oryza sativa subsp. japonica GN=Os04g0444900 PE=2 SV=2 [Swiss-Prot]
  • OSJNBa0027P08.7 [Oryza sativa (japonica cultivar-group)]gi|38344539|emb|CAD40971.2| OSJNBa0027P08.7 [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • Os04g0444900 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • OSJNBa0027P08.7 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 256 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDGGYGSVTI VHDARSPEDV FQDFCGRRSG IVKALTIEVE KFYKQCDPEK ENLCLYGLPN  60
   61 GTWAVTLPAD EVPPELPEPA LGINFARDGM QEKDWLSLIA VHSDSWLLSV AFYFGARFGF 120
  121 DKKARERLFM MTSSLPTVFE VVSGGVNTQS KTANGSSKNK SGSKPPKRPN SDSKPQKQVQ 180
  181 AKYEEENGGR GNGGDEDQAE TICGACGEAY ANGEFWICCD ICETWFHGKC VRITPAKAEH 240
  241 IKHYKCPGCS NKRTRE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..168] MSA 3.278958 View MSA. No confident structure predictions are available.
    2 View Details [169..256] PSI-BLAST 15.30103 No description for 2f6jA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle