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Protein Overview: gi|38347027, gi|...

General Information:
Name(s) found: gi|50922241 [NCBI NR]
gi|38347027 [NCBI NR]
gi|38344719 [NCBI NR]
Description(s) found:
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  • gi|50922241|ref|XP_471481.1| OSJNBb0115I09.23 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38347027|emb|CAE02555.2| OSJNBb0067G11.2 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|38344719|emb|CAE05261.2| OSJNBb0115I09.23 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • OSJNBb0115I09.23 [Oryza sativa (japonica cultivar-group)]gi|38344719|emb|CAE05261.2| OSJNBb0115I09.23 [Oryza sativa (japonica cultivar-group)]gi|38347027|emb|CAE02555.2| OSJNBb0067G11.2 [Oryza sativa (japonica cultivar-group)] [nrdb_11152004_Chlamydomonas]
  • OSJNBb0115I09.23 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • OSJNBb0067G11.2 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 1047 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADRDEEQIL YDTIAEGSSQ YWNEEEGNED PNQYLNEEGN VERDAEGNQQ GHVERDVEGN  60
   61 QEEEGSGSQP SVGQKRARGQ RGAAKKLEGR HIITEVEEDG RPSAPAEAAK NYVRHSGWVV 120
  121 RDNVPVSTVY WRRTRARGDH ESFVPDSEKE MLWTTMLETF TLPAGTEDKV KRWTLKKMAE 180
  181 QFQSFKGDLY QKYILKGQTP NFDTFPKLRD HWDEFVAYKT GEQGQAMMER NKENAAKKKY 240
  241 HHHLGSGGYS VAMPKWEQME ASLIERGIEP ATANWPERSK FWYYAHGGTL NPADGSLVFG 300
  301 YQIQEAARRL TDAVEASSQG TFRPDRDRDE LTLALQTPEH PGRTRGKGVI PWKIGFKEDI 360
  361 HTYRSRMRSK RDTEAKIADL EFRVSSYELN MQEEVARKVD ERMAAHRSHD PQPTIPPAMV 420
  421 SPSGNRSSCA STGQVGSQSM DAMQTQDEST CPVDDITQRT PCELHIPFKN LSIKVASGMA 480
  481 IPTDPSGTYH CRPILAGYSK VEVELVEGAY EDLELDYPGG DGETHLRDTC HAIILWRRRY 540
  541 IILPGRQAAS RAPSPPAPPS PPQDPAPSPP HAPPAPSPPQ APASTPPQDP APTPPRAPTP 600
  601 TPPQAPLPAP SKSRAPPAPP LAHTRATKKA KVDAAKNKDP GYDCTQEELD AYVASEVKKQ 660
  661 FKPRSPEKKI PIDPSVRNFF RGMSASVKEA IKLSDYERTL KKASSGKSKP VPQLGEQPNQ 720
  721 EIEPLVTGKE MTIEQFITDT GLTTDQLLGV APIEKAEVKY MYELGKPLVK PELLQSLPTQ 780
  781 MYKFHQLYME MSATGREMIG ARIRDTDFLQ GDDILWINFR GIYELYQLDA LDVSIMSCWI 840
  841 LMEIQRARRR RVFDTGFIDP RKVNVAMLDQ YPQETEDNLV HLLKAQHYKT FILLPYNIEF 900
  901 HWVLLLFDLE ACTVNVYDSM DKKESTFERA WYRFRHLVRG KWRERLRRKF KFPCAKQKQG 960
  961 TNLCGYYVCE YCHCLADQII TTRELDFIRM RDNLTTHKEF ITAVQEQLMG FINEEILDPK1020
 1021 GEFYYDGNTI HRSLASELAA STTTSKS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..184] deduced N/A No confident structure predictions are available.
    2 View Details [185..318] MSA 1.297988 View MSA. No confident structure predictions are available.
    3 View Details [319..414] deduced N/A No confident structure predictions are available.
    4 View Details [415..600] deduced N/A No confident structure predictions are available.
    5 View Details [601..797] deduced N/A No confident structure predictions are available.
    6 View Details [798..1047] PSI-BLAST 9.39794 No description for 2iycA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle