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Protein Overview: gi|108708379, gi...

General Information:
Name(s) found: gi|34896278 [NCBI NR]
gi|215693252 [NCBI NR]
gi|12039350 [NCBI NR]
gi|115453197 [NCBI NR]
gi|113548670 [NCBI NR]
gi|108708379 [NCBI NR]
Description(s) found:
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  • gi|34896278|ref|NP_909483.1| putative centromere/microtubule binding protein [Oryza sativa] [NCBI NR]
  • gi|215693252|dbj|BAG88634.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|12039350|gb|AAG46137.1|AC082644_19 putative centromere/microtubule binding protein [Oryza sativa] [NCBI NR]
  • gi|115453197|ref|NP_001050199.1| Os03g0370500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113548670|dbj|BAF12113.1| Os03g0370500 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|108708379|gb|ABF96174.1| H/ACA ribonucleoprotein complex subunit 4, putative, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • putative centromere/microtubule binding protein [Oryza sativa]gi|12039350|gb|AAG46137.1| putative centromere/microtubule binding protein [Oryza sativa] [nrdb_11152004_Chlamydomonas]
  • Os03g0370500 [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
  • putative centromere/microtubule binding protein [Oryza sativa] [nr-271106-contam.fasta]
  • H/ACA ribonucleoprotein complex subunit 4, putative, expressed [Oryza sativa (japonica cultivar-group)] [nr-271106-contam.fasta]
    • Organism: Oryza sativa Japonica Group
    Length: 591 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTPPPAAAA SPATDQGKTK SKKKSKKHQE DTSSSLAVAA ASVDEAAEAK ADGYLIKPQS  60
   61 VAPPLDTSAW PLLLKNYDRL NVRTGHYTPL PAGHSPLKRP IAEYLRYGVI NLDKPSNPSS 120
  121 HEVVAWIKRL LRVEKTGHSG TLDPKVTGNL IVCVDRATRL VKSQQGAGKE YVCVARFHAA 180
  181 VPDTARVARA LEALTGAVFQ RPPLISAVKR QLRVRTIYES KLLEHDADRH LAVFWISCEA 240
  241 GTYVRTLCVH LGLLLGVGAH MQELRRVRSG ILGETDNMVT MHDVMDARWA MDNFNDESYL 300
  301 RRIVMPLEVL LTSYKRLVVK DSAVNAICYG AKLMIPGLLR FENEIEVGEE VVLMTTKGEA 360
  361 IAIGIAEMTT AVMATCDHGA VAKIKRVVMD RDTYPRKWGL GPVALKKKKM VAEGLLDKHG 420
  421 KPNEKTPSEW LRNAVLPAGG DAMIAGIAAA PEPEKPKVKE EADVAEETKE KKKKKHKDWA 480
  481 GDNADEGRKR KVGDDDLSAS VSAKKIKVEE EADAVEGEKS EKKKKKKKDK AESAYADGEV 540
  541 KAELSDGEKG GSEKKKKKKK SKEGEAGDDE AEKSEKKKEK KKKNRDAEVT Q

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] deduced N/A No confident structure predictions are available.
    2 View Details [94..390] PSI-BLAST 94.69897 No description for 2ausC was found.
    3 View Details [391..591] PSI-BLAST 3.09691 No description for 2dfsA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle