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Protein Overview: gi|16127653, gi|...

General Information:
Name(s) found: gi|16127653 [NCBI NR]
gi|13425137 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|16127653|ref|NP_422217.1| hypothetical protein CC_3423 [Caulobacter crescentus CB15] [NCBI NR]
  • gi|13425137|gb|AAK25385.1| conserved hypothetical protein [Caulobacter crescentus CB15] [NCBI NR]
    • Organism: Caulobacter crescentus CB15
    Length: 219 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVQTLEGRR AFIRDNTQLL PPPHAPELAL HLADEVTPLW KLTEEALEEI GLPPPFWAFA  60
   61 WAGGQALARY ILDHPETVAG KTVFDFATGS GLVAIAAMKA GAKSVLANDI DVFCEAAVTL 120
  121 NAEANGVLVA FTEANLLGGP PPEAQVLLAG DICYEKPMAE AVMDWLRRGR AQGSTVLIGD 180
  181 PGRTYFRKDD LVKLAEYQVE TTRELEDMAV KRTSVWTLP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] PSI-BLAST 19.69897 Crystal Structure of RumA, the iron-sulfur cluster containing E. coli 23S Ribosomal RNA 5-Methyluridine Methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.723277178398499 bayes_pls_golite062009
  • transferase activity
    		•  0.64512166557639 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle